Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CRIPT
  • Mouse genes Cript
  • Rat genes Cript
  • Zfish genes cript
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cript

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008017	microtubule binding	Cript	IMP		Rat	PMID:10570482|RGD:8554363
Molecular Function	GO:0030165	PDZ domain binding	CRIPT	IDA		Human	PMID:17474715
Molecular Function	GO:0030165	PDZ domain binding	Cript	IDA		Rat	PMID:9581762|RGD:632510
Molecular Function	GO:0005515	protein binding	CRIPT	IPI	UniProtKB:P31016	Human	PMID:11937501
Molecular Function	GO:0005515	protein binding	CRIPT	IPI	UniProtKB:P78352	Human	PMID:11937501
Molecular Function	GO:0005515	protein binding	CRIPT	IPI	UniProtKB:Q62936	Human	PMID:11937501
Molecular Function	GO:0005515	protein binding	CRIPT	IPI	UniProtKB:P78352	Human	PMID:20018661
Molecular Function	GO:0005515	protein binding	CRIPT	IPI	UniProtKB:O76024	Human	PMID:32814053
Molecular Function	GO:0044877	protein-containing complex binding	Cript	IPI	RGD:620224|RGD:619895|RGD:2738	Rat	PMID:9581762|RGD:632510
Molecular Function	GO:0097110	scaffold protein binding	CRIPT	IDA		Human	PMID:17474715
Cellular Component	GO:0030425	dendrite	Cript	IDA		Rat	PMID:9581762|RGD:632510
Cellular Component	GO:0043198	dendritic shaft	Cript	IDA		Rat	PMID:9581762|RGD:632510
Cellular Component	GO:0043197	dendritic spine	Cript	IDA		Rat	PMID:9581762|RGD:632510
Cellular Component	GO:0098978	glutamatergic synapse	Cript	IDA		Rat	PMID:10570482|RGD:8554363
Cellular Component	GO:0098978	glutamatergic synapse	Cript	IMP		Rat	PMID:10570482|RGD:8554363
Cellular Component	GO:0098978	glutamatergic synapse	Cript	IDA		Rat	PMID:11160391|RGD:155230802
Cellular Component	GO:0043025	neuronal cell body	Cript	IDA		Rat	PMID:9581762|RGD:632510
Cellular Component	GO:0014069	postsynaptic density	Cript	IDA		Rat	PMID:9581762|RGD:632510
Cellular Component	GO:0099092	postsynaptic density, intracellular component	Cript	IDA		Rat	PMID:11160391|RGD:155230802
Biological Process	GO:0031122	cytoplasmic microtubule organization	Cript	IDA		Rat	PMID:9581762|RGD:632510
Biological Process	GO:0045184	establishment of protein localization	Cript	IDA		Rat	PMID:9581762|RGD:632510
Biological Process	GO:0035372	protein localization to microtubule	Cript	IMP		Rat	PMID:10570482|RGD:8554363
Biological Process	GO:0099151	regulation of postsynaptic density assembly	Cript	IDA		Rat	PMID:10570482|RGD:8554363
Biological Process	GO:0099151	regulation of postsynaptic density assembly	Cript	IMP		Rat	PMID:10570482|RGD:8554363
Biological Process	GO:1902897	regulation of postsynaptic density protein 95 clustering	Cript	IMP		Rat	PMID:10570482|RGD:8554363

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern