Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CS
  • Mouse genes Csl
  • Rat genes Cs
  • Zfish genes cs
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Csl

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004108	citrate (Si)-synthase activity	CS	IDA		Human	PMID:9543345
Molecular Function	GO:0004108	citrate (Si)-synthase activity	Cs	IDA		Rat	PMID:15809022|RGD:1582471
Molecular Function	GO:0004108	citrate (Si)-synthase activity	Cs	IDA		Rat	PMID:5820645|RGD:2306824
Molecular Function	GO:0004108	citrate (Si)-synthase activity	Cs	IDA		Rat	PMID:818082|RGD:2306825
Molecular Function	GO:0004108	citrate (Si)-synthase activity	Cs	IDA		Rat	PMID:938457|RGD:2306828
Molecular Function	GO:0004108	citrate (Si)-synthase activity	Cs	IDA		Rat	PMID:9712727|RGD:2306877
Molecular Function	GO:0003723	RNA binding	CS	HDA		Human	PMID:22681889
Cellular Component	GO:0070062	extracellular exosome	CS	HDA		Human	PMID:20458337
Cellular Component	GO:0005759	mitochondrial matrix	CS	IDA		Human	PMID:9543345
Cellular Component	GO:0005739	mitochondrion	CS	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005739	mitochondrion	CS	HDA		Human	PMID:20833797
Cellular Component	GO:0005739	mitochondrion	Csl	HDA		Mouse	PMID:18614015
Cellular Component	GO:0005739	mitochondrion	Cs	IDA		Rat	PMID:15809022|RGD:1582471
Cellular Component	GO:0005739	mitochondrion	Cs	IDA		Rat	PMID:5820645|RGD:2306824
Cellular Component	GO:0005739	mitochondrion	Cs	IDA		Rat	PMID:938457|RGD:2306828
Cellular Component	GO:0005739	mitochondrion	Cs	IDA		Rat	PMID:9712727|RGD:2306877
Cellular Component	GO:0005634	nucleus	CS	HDA		Human	PMID:21630459
Biological Process	GO:0006084	acetyl-CoA metabolic process	Cs	IDA		Rat	PMID:5820645|RGD:2306824
Biological Process	GO:0006084	acetyl-CoA metabolic process	Cs	IDA		Rat	PMID:818082|RGD:2306825
Biological Process	GO:0006084	acetyl-CoA metabolic process	Cs	IDA		Rat	PMID:938457|RGD:2306828
Biological Process	GO:0005975	carbohydrate metabolic process	CS	IDA		Human	PMID:9543345
Biological Process	GO:0006101	citrate metabolic process	Cs	IDA		Rat	PMID:5820645|RGD:2306824
Biological Process	GO:0006101	citrate metabolic process	Cs	IDA		Rat	PMID:818082|RGD:2306825
Biological Process	GO:0006101	citrate metabolic process	Cs	IDA		Rat	PMID:938457|RGD:2306828
Biological Process	GO:0006101	citrate metabolic process	Cs	IDA		Rat	PMID:9712727|RGD:2306877
Biological Process	GO:0006107	oxaloacetate metabolic process	Cs	IDA		Rat	PMID:5820645|RGD:2306824
Biological Process	GO:0006107	oxaloacetate metabolic process	Cs	IDA		Rat	PMID:818082|RGD:2306825
Biological Process	GO:0006107	oxaloacetate metabolic process	Cs	IDA		Rat	PMID:938457|RGD:2306828
Biological Process	GO:0014823	response to activity	cs	IDA		Zfish	PMID:16990399
Biological Process	GO:0006099	tricarboxylic acid cycle	Cs	IDA		Rat	PMID:938457|RGD:2306828
Biological Process	GO:0006099	tricarboxylic acid cycle	Cs	IDA		Rat	PMID:9712727|RGD:2306877

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern