Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CSMD1
  • Mouse genes Csmd1
  • Rat genes Csmd1
  • Zfish genes csmd1a,csmd1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Csmd1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	CSMD1	IPI	UniProtKB:P84022	Human	PMID:22538441
Biological Process	GO:1990708	conditioned place preference	Csmd1	IMP	MGI:MGI:3528558	Mouse	PMID:26171607
Biological Process	GO:0008585	female gonad development	Csmd1	IMP	MGI:MGI:5473214	Mouse	PMID:31604923
Biological Process	GO:0042593	glucose homeostasis	Csmd1	IMP	MGI:MGI:3528558	Mouse	PMID:24244513
Biological Process	GO:0008584	male gonad development	Csmd1	IMP	MGI:MGI:5473214	Mouse	PMID:31604923
Biological Process	GO:0060745	mammary gland branching involved in pregnancy	Csmd1	IMP	MGI:MGI:5473214	Mouse	PMID:31604923
Biological Process	GO:0007613	memory	Csmd1	IMP	MGI:MGI:3528558	Mouse	PMID:26171607
Biological Process	GO:0035846	oviduct epithelium development	Csmd1	IGI	MGI:MGI:88227	Mouse	PMID:31604923
Biological Process	GO:0001964	startle response	Csmd1	IMP	MGI:MGI:3528558	Mouse	PMID:24244513

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern