Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CSRP1
  • Mouse genes Csrp1
  • Rat genes Csrp1
  • Zfish genes csrp1a,csrp1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Csrp1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	CSRP1	IPI	UniProtKB:Q16790	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CSRP1	IPI	UniProtKB:Q9H902	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Csrp1	IPI	PR:Q7TPR4	Mouse	PMID:10926853
Molecular Function	GO:0003723	RNA binding	CSRP1	HDA		Human	PMID:22658674
Cellular Component	GO:0070062	extracellular exosome	CSRP1	HDA		Human	PMID:19056867
Cellular Component	GO:0005925	focal adhesion	CSRP1	HDA		Human	PMID:21423176
Cellular Component	GO:0005634	nucleus	CSRP1	IDA		Human	PMID:26924529
Biological Process	GO:0042074	cell migration involved in gastrulation	csrp1a	IMP	ZFIN:ZDB-MRPHLNO-070910-1,ZFIN:ZDB-MRPHLNO-070910-2	Zfish	PMID:17592114
Biological Process	GO:0060027	convergent extension involved in gastrulation	csrp1a	IMP	ZFIN:ZDB-MRPHLNO-070910-1,ZFIN:ZDB-MRPHLNO-070910-2	Zfish	PMID:17592114
Biological Process	GO:0003007	heart morphogenesis	csrp1a	IMP	ZFIN:ZDB-MRPHLNO-070910-1,ZFIN:ZDB-MRPHLNO-070910-2	Zfish	PMID:17592114
Biological Process	GO:0007254	JNK cascade	csrp1a	IMP	ZFIN:ZDB-MRPHLNO-070910-1,ZFIN:ZDB-MRPHLNO-070910-2	Zfish	PMID:17592114
Biological Process	GO:0031102	neuron projection regeneration	csrp1a	IMP	ZFIN:ZDB-MRPHLNO-120911-2	Zfish	PMID:22288476
Biological Process	GO:0031102	neuron projection regeneration	csrp1a	IMP	ZFIN:ZDB-MRPHLNO-070910-1	Zfish	PMID:22288476
Biological Process	GO:0070527	platelet aggregation	CSRP1	HMP		Human	PMID:23382103
Biological Process	GO:0016055	Wnt signaling pathway	csrp1a	IMP	ZFIN:ZDB-MRPHLNO-070910-1,ZFIN:ZDB-MRPHLNO-070910-2	Zfish	PMID:17592114

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern