Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CTR9
  • Mouse genes Ctr9
  • Rat genes Ctr9
  • Zfish genes ctr9
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ctr9

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	CTR9	IPI	UniProtKB:Q6P1J9	Human	PMID:15923622
Molecular Function	GO:0005515	protein binding	CTR9	IPI	UniProtKB:Q6P1J9	Human	PMID:16024656
Molecular Function	GO:0005515	protein binding	CTR9	IPI	UniProtKB:Q8N7H5	Human	PMID:16024656
Molecular Function	GO:0005515	protein binding	CTR9	IPI	UniProtKB:Q9GZS3	Human	PMID:16024656
Molecular Function	GO:0005515	protein binding	CTR9	IPI	UniProtKB:Q6P1J9	Human	PMID:19136632
Molecular Function	GO:0005515	protein binding	CTR9	IPI	UniProtKB:Q8N7H5	Human	PMID:19410543
Molecular Function	GO:0005515	protein binding	CTR9	IPI	UniProtKB:Q6P1J9	Human	PMID:20178742
Molecular Function	GO:0005515	protein binding	CTR9	IPI	UniProtKB:Q8N7H5	Human	PMID:20178742
Molecular Function	GO:0005515	protein binding	CTR9	IPI	UniProtKB:Q9GZS3	Human	PMID:20178742
Molecular Function	GO:0005515	protein binding	CTR9	IPI	UniProtKB:Q03164	Human	PMID:20541477
Molecular Function	GO:0005515	protein binding	CTR9	IPI	UniProtKB:Q6P1J9	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	CTR9	IPI	UniProtKB:Q8N7H5	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	CTR9	IPI	UniProtKB:Q9GZS3	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	CTR9	IPI	UniProtKB:Q03468	Human	PMID:26030138
Molecular Function	GO:0005515	protein binding	CTR9	IPI	UniProtKB:Q6P1J9	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	CTR9	IPI	UniProtKB:Q8N7H5	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	CTR9	IPI	UniProtKB:Q9GZS3	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	CTR9	IPI	UniProtKB:Q6P1J9	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	CTR9	IPI	UniProtKB:Q6P1J9	Human	PMID:29774127
Molecular Function	GO:0005515	protein binding	Ctr9	IPI	UniProtKB:P83870	Mouse	MGI:MGI:6203683|PMID:27749823
Molecular Function	GO:0005515	protein binding	Ctr9	IPI	UniProtKB:Q5XJV7	Mouse	MGI:MGI:5812827|PMID:27864380
Molecular Function	GO:0005515	protein binding	Ctr9	IPI	PR:P16277	Mouse	PMID:8636124
Molecular Function	GO:0042169	SH2 domain binding	Ctr9	IDA		Mouse	PMID:8636124
Cellular Component	GO:0016593	Cdc73/Paf1 complex	CTR9	IDA		Human	PMID:16307923
Cellular Component	GO:0016593	Cdc73/Paf1 complex	CTR9	IDA		Human	PMID:20178742
Cellular Component	GO:0016593	Cdc73/Paf1 complex	Ctr9	IPI	UniProtKB:Q8JZM7	Mouse	MGI:MGI:6203683|PMID:27749823
Cellular Component	GO:0016593	Cdc73/Paf1 complex	ctr9	IDA		Zfish	PMID:21338598
Cellular Component	GO:0000791	euchromatin	Ctr9	IDA		Mouse	MGI:MGI:3849235|PMID:19345177
Cellular Component	GO:0005654	nucleoplasm	CTR9	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	Ctr9	IDA		Mouse	PMID:8636124
Cellular Component	GO:0005634	nucleus	Ctr9	IDA		Mouse	PMID:24036311
Cellular Component	GO:0005634	nucleus	ctr9	IDA		Zfish	PMID:21338598
Biological Process	GO:0001832	blastocyst growth	Ctr9	IMP		Mouse	PMID:24036311
Biological Process	GO:0001832	blastocyst growth	Ctr9	IGI	MGI:MGI:101893	Mouse	PMID:24036311
Biological Process	GO:0001835	blastocyst hatching	Ctr9	IMP		Mouse	PMID:27869233
Biological Process	GO:0071222	cellular response to lipopolysaccharide	Ctr9	IDA		Mouse	MGI:MGI:5319608|PMID:17911113
Biological Process	GO:0001711	endodermal cell fate commitment	Ctr9	IMP		Mouse	MGI:MGI:3849235|PMID:19345177
Biological Process	GO:0007507	heart development	ctr9	IMP		Zfish	PMID:21338598|ZFIN:ZDB-PUB-110316-17
Biological Process	GO:0080182	histone H3-K4 trimethylation	CTR9	IMP		Human	PMID:16024656
Biological Process	GO:0001826	inner cell mass cell differentiation	Ctr9	IMP		Mouse	PMID:24036311
Biological Process	GO:0070102	interleukin-6-mediated signaling pathway	Ctr9	IMP		Mouse	MGI:MGI:5319608|PMID:17911113
Biological Process	GO:0045638	negative regulation of myeloid cell differentiation	CTR9	IDA		Human	PMID:20541477
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Ctr9	IMP		Mouse	MGI:MGI:3849235|PMID:19345177
Biological Process	GO:0014032	neural crest cell development	ctr9	IMP	ZFIN:ZDB-MRPHLNO-071219-5	Zfish	PMID:17721442
Biological Process	GO:0043473	pigmentation	ctr9	IMP	ZFIN:ZDB-MRPHLNO-071219-5	Zfish	PMID:17721442
Biological Process	GO:0051571	positive regulation of histone H3-K4 methylation	CTR9	IMP		Human	PMID:16024656
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	CTR9	IDA		Human	PMID:16307923
Biological Process	GO:0007259	receptor signaling pathway via JAK-STAT	Ctr9	IMP		Mouse	MGI:MGI:5319608|PMID:17911113
Biological Process	GO:2000653	regulation of genetic imprinting	Ctr9	IMP		Mouse	PMID:24036311
Biological Process	GO:0001756	somitogenesis	ctr9	IMP	ZFIN:ZDB-MRPHLNO-071219-5	Zfish	PMID:17721442
Biological Process	GO:0019827	stem cell population maintenance	CTR9	IDA		Human	PMID:19345177
Biological Process	GO:0019827	stem cell population maintenance	Ctr9	IMP		Mouse	MGI:MGI:3849235|PMID:19345177
Biological Process	GO:0006368	transcription elongation by RNA polymerase II	CTR9	IDA		Human	PMID:20178742
Biological Process	GO:0001829	trophectodermal cell differentiation	Ctr9	IMP		Mouse	PMID:24036311

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern