Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CYGB
  • Mouse genes Cygb
  • Rat genes Cygb
  • Zfish genes cygb1,cygb2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cygb

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004096	catalase activity	Cygb	IDA		Rat	PMID:11320098|RGD:68672
Molecular Function	GO:0047888	fatty acid peroxidase activity	Cygb	IDA		Rat	PMID:11320098|RGD:68672
Molecular Function	GO:0020037	heme binding	Cygb	IDA		Rat	PMID:11320098|RGD:68672
Molecular Function	GO:0098809	nitrite reductase activity	cygb1	IDA		Zfish	PMID:26721561
Molecular Function	GO:0098809	nitrite reductase activity	cygb2	IDA		Zfish	PMID:26721561
Molecular Function	GO:0019825	oxygen binding	cygb1	IPI	GenPept:NP_085056	Zfish	PMID:28671819
Molecular Function	GO:0019825	oxygen binding	cygb1	IDA		Zfish	PMID:31257865
Molecular Function	GO:0019825	oxygen binding	cygb2	IDA		Zfish	PMID:31257865
Molecular Function	GO:0019825	oxygen binding	cygb2	IPI	GenPept:NP_085056	Zfish	PMID:28671819
Molecular Function	GO:0004601	peroxidase activity	Cygb	IDA		Rat	PMID:11320098|RGD:68672
Molecular Function	GO:0005515	protein binding	CYGB	IPI	UniProtKB:Q8WTU0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CYGB	IPI	UniProtKB:O43488	Human	PMID:28536627
Molecular Function	GO:0005515	protein binding	CYGB	IPI	UniProtKB:B1AHC3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CYGB	IPI	UniProtKB:P85298-4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CYGB	IPI	UniProtKB:Q08AG7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CYGB	IPI	UniProtKB:Q8WTU0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CYGB	IPI	UniProtKB:Q96KN4	Human	PMID:32296183
Cellular Component	GO:0005737	cytoplasm	Cygb	IDA		Rat	PMID:14647402|RGD:9685173
Cellular Component	GO:0043005	neuron projection	Cygb	IDA		Mouse	PMID:14660570
Cellular Component	GO:0043025	neuronal cell body	Cygb	IDA		Mouse	PMID:14660570
Biological Process	GO:0019395	fatty acid oxidation	Cygb	IDA		Rat	PMID:11320098|RGD:68672
Biological Process	GO:0032966	negative regulation of collagen biosynthetic process	Cygb	IDA		Rat	PMID:20719976|RGD:9685174
Biological Process	GO:0010764	negative regulation of fibroblast migration	Cygb	IDA		Rat	PMID:14647402|RGD:9685173
Biological Process	GO:2000490	negative regulation of hepatic stellate cell activation	Cygb	IDA		Rat	PMID:16581302|RGD:9685176
Biological Process	GO:0014032	neural crest cell development	cygb1	IMP	ZFIN:ZDB-GENO-220805-4	Zfish	PMID:33358912
Biological Process	GO:0014032	neural crest cell development	cygb1	IMP	ZFIN:ZDB-MRPHLNO-211129-1	Zfish	PMID:33358912
Biological Process	GO:0014032	neural crest cell development	cygb1	IMP	ZFIN:ZDB-MRPHLNO-211129-2	Zfish	PMID:33358912
Biological Process	GO:1905292	regulation of neural crest cell differentiation	cygb1	IMP	ZFIN:ZDB-MRPHLNO-211129-1	Zfish	PMID:33358912
Biological Process	GO:1905292	regulation of neural crest cell differentiation	cygb1	IMP	ZFIN:ZDB-MRPHLNO-211129-2	Zfish	PMID:33358912
Biological Process	GO:1905292	regulation of neural crest cell differentiation	cygb1	IMP	ZFIN:ZDB-GENO-220805-4	Zfish	PMID:33358912
Biological Process	GO:0046686	response to cadmium ion	cygb1	IEP		Zfish	PMID:16799861
Biological Process	GO:0001666	response to hypoxia	Cygb	IEP		Rat	PMID:14660570|RGD:9685175
Biological Process	GO:0006979	response to oxidative stress	Cygb	IDA		Rat	PMID:11320098|RGD:68672

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern