Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CYP26C1
  • Mouse genes Cyp26c1
  • Rat genes Cyp26c1
  • Zfish genes cyp26c1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cyp26c1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	CYP26C1	IPI	UniProtKB:Q96BD6	Human	PMID:35044719
Molecular Function	GO:0008401	retinoic acid 4-hydroxylase activity	CYP26C1	IDA		Human	PMID:14532297
Molecular Function	GO:0001972	retinoic acid binding	CYP26C1	IDA		Human	PMID:14532297
Biological Process	GO:0009952	anterior/posterior pattern specification	Cyp26c1	IGI	MGI:MGI:1096359	Mouse	PMID:17067568
Biological Process	GO:0055014	atrial cardiac muscle cell development	cyp26c1	IGI	ZFIN:ZDB-MRPHLNO-070410-6,ZFIN:ZDB-MRPHLNO-131002-1,ZFIN:ZDB-MRPHLNO-131002-2	Zfish	PMID:24667328
Biological Process	GO:0055014	atrial cardiac muscle cell development	cyp26c1	IGI	ZFIN:ZDB-GENO-070411-2,ZFIN:ZDB-MRPHLNO-070410-6	Zfish	PMID:24667328
Biological Process	GO:0007417	central nervous system development	Cyp26c1	IGI	MGI:MGI:1096359	Mouse	PMID:17067568
Biological Process	GO:0030902	hindbrain development	cyp26c1	IGI	ZFIN:ZDB-GENO-070411-2,ZFIN:ZDB-MRPHLNO-070410-1,ZFIN:ZDB-MRPHLNO-070410-6	Zfish	PMID:17164423
Biological Process	GO:0014032	neural crest cell development	Cyp26c1	IGI	MGI:MGI:1096359	Mouse	PMID:17067568
Biological Process	GO:0048284	organelle fusion	Cyp26c1	IGI	MGI:MGI:1096359	Mouse	PMID:17067568
Biological Process	GO:0003151	outflow tract morphogenesis	cyp26c1	IGI	ZFIN:ZDB-MRPHLNO-070410-6,ZFIN:ZDB-MRPHLNO-131002-1	Zfish	PMID:27893754
Biological Process	GO:0033339	pectoral fin development	cyp26c1	IGI	ZFIN:ZDB-MRPHLNO-120313-1,ZFIN:ZDB-MRPHLNO-170124-1	Zfish	PMID:27861128
Biological Process	GO:0033339	pectoral fin development	cyp26c1	IMP	ZFIN:ZDB-MRPHLNO-120313-1	Zfish	PMID:27861128
Biological Process	GO:0034653	retinoic acid catabolic process	CYP26C1	IDA		Human	PMID:14532297
Biological Process	GO:0042573	retinoic acid metabolic process	cyp26c1	IDA		Zfish	PMID:16455818
Biological Process	GO:0021661	rhombomere 4 morphogenesis	cyp26c1	IGI	ZFIN:ZDB-GENO-070411-2,ZFIN:ZDB-MRPHLNO-070410-6	Zfish	PMID:17164423
Biological Process	GO:0021661	rhombomere 4 morphogenesis	cyp26c1	IGI	ZFIN:ZDB-GENO-070411-2,ZFIN:ZDB-MRPHLNO-070410-1,ZFIN:ZDB-MRPHLNO-070410-6	Zfish	PMID:17164423
Biological Process	GO:0001944	vasculature development	cyp26c1	IGI	ZFIN:ZDB-GENO-070411-2,ZFIN:ZDB-MRPHLNO-070410-6	Zfish	PMID:24667328
Biological Process	GO:0001944	vasculature development	cyp26c1	IGI	ZFIN:ZDB-MRPHLNO-070410-6,ZFIN:ZDB-MRPHLNO-131002-1,ZFIN:ZDB-MRPHLNO-131002-2	Zfish	PMID:24667328

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern