Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CYS1
  • Mouse genes Cys1
  • Rat genes Cys1
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cys1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003682	chromatin binding	Cys1	IDA		Mouse	PMID:24349431
Molecular Function	GO:0005515	protein binding	CYS1	IPI	UniProtKB:A6NIH7	Human	PMID:22085962
Molecular Function	GO:0005515	protein binding	CYS1	IPI	UniProtKB:Q13432	Human	PMID:22085962
Molecular Function	GO:0005515	protein binding	Cys1	IPI	PR:P25233	Mouse	PMID:24349431
Molecular Function	GO:0003714	transcription corepressor activity	Cys1	IDA		Mouse	PMID:24349431
Cellular Component	GO:0005930	axoneme	Cys1	IDA		Mouse	PMID:19850956
Cellular Component	GO:0005930	axoneme	Cys1	IDA		Mouse	PMID:11854326
Cellular Component	GO:0036064	ciliary basal body	Cys1	IDA		Mouse	PMID:11854326
Cellular Component	GO:0005829	cytosol	Cys1	IDA		Mouse	PMID:24349431
Cellular Component	GO:0016020	membrane	Cys1	IDA		Mouse	PMID:24349431
Cellular Component	GO:0005634	nucleus	Cys1	IDA		Mouse	PMID:24349431
Biological Process	GO:0048839	inner ear development	Cys1	IMP	MGI:MGI:1856831	Mouse	PMID:1952600
Biological Process	GO:0001822	kidney development	Cys1	IMP	MGI:MGI:1856831	Mouse	PMID:18829740
Biological Process	GO:0043433	negative regulation of DNA-binding transcription factor activity	Cys1	IDA		Mouse	PMID:24349431
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Cys1	IDA		Mouse	PMID:24349431

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern