Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes DAAM1
  • Mouse genes Daam1
  • Rat genes Daam1
  • Zfish genes daam1a,daam1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Daam1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	DAAM1	IPI	UniProtKB:Q9Y4D1	Human	PMID:16630611
Molecular Function	GO:0042802	identical protein binding	DAAM1	IPI	UniProtKB:Q9Y4D1	Human	PMID:18218625
Molecular Function	GO:0005515	protein binding	DAAM1	IPI	UniProtKB:P00523	Human	PMID:16630611
Molecular Function	GO:0005515	protein binding	DAAM1	IPI	UniProtKB:Q15642-2	Human	PMID:16630611
Molecular Function	GO:0005515	protein binding	DAAM1	IPI	UniProtKB:Q5T0N5	Human	PMID:16630611
Molecular Function	GO:0005515	protein binding	DAAM1	IPI	UniProtKB:P61586	Human	PMID:18218625
Molecular Function	GO:0005515	protein binding	DAAM1	IPI	UniProtKB:P61586	Human	PMID:25241761
Molecular Function	GO:0005515	protein binding	DAAM1	IPI	UniProtKB:Q9ULD6	Human	PMID:26644512
Molecular Function	GO:0005515	protein binding	Daam1	IPI	UniProtKB:O15085-2	Mouse	MGI:MGI:5437385|PMID:22632972
Cellular Component	GO:0036064	ciliary basal body	DAAM1	IDA		Human	PMID:26644512
Cellular Component	GO:0005829	cytosol	DAAM1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016020	membrane	DAAM1	HDA		Human	PMID:19946888
Cellular Component	GO:0031514	motile cilium	DAAM1	IDA		Human	PMID:26644512
Cellular Component	GO:0005886	plasma membrane	DAAM1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0001725	stress fiber	DAAM1	IDA		Human	PMID:20534871
Cellular Component	GO:0001725	stress fiber	Daam1	IDA		Mouse	MGI:MGI:4887519|PMID:20534871
Biological Process	GO:0060026	convergent extension	daam1b	IDA		Zfish	PMID:17412835
Biological Process	GO:0021986	habenula development	daam1a	IMP	ZFIN:ZDB-MRPHLNO-070712-4	Zfish	PMID:24046318
Biological Process	GO:0021986	habenula development	daam1a	IGI	ZFIN:ZDB-MRPHLNO-070712-4,ZFIN:ZDB-MRPHLNO-110825-3	Zfish	PMID:24046318
Biological Process	GO:0048793	pronephros development	daam1a	IMP	ZFIN:ZDB-MRPHLNO-090609-16	Zfish	PMID:21804089

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern