Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes DBNL
  • Mouse genes Dbnl
  • Rat genes Dbnl
  • Zfish genes dbnla,dbnlb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Dbnl

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003779	actin binding	Dbnl	IDA		Mouse	PMID:10637315
Molecular Function	GO:0051015	actin filament binding	Dbnl	IDA		Mouse	MGI:MGI:1353214|PMID:10637315
Molecular Function	GO:0045296	cadherin binding	DBNL	HDA		Human	PMID:25468996
Molecular Function	GO:0005515	protein binding	DBNL	IPI	UniProtKB:Q9H788	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	DBNL	IPI	UniProtKB:P78314	Human	PMID:17306257
Molecular Function	GO:0005515	protein binding	DBNL	IPI	UniProtKB:Q9H788	Human	PMID:19060904
Molecular Function	GO:0005515	protein binding	DBNL	IPI	UniProtKB:Q96AP0	Human	PMID:21044950
Molecular Function	GO:0005515	protein binding	DBNL	IPI	UniProtKB:Q9H788	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	DBNL	IPI	UniProtKB:Q9H788-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	DBNL	IPI	UniProtKB:O14645	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DBNL	IPI	UniProtKB:O14901	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DBNL	IPI	UniProtKB:P06396	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DBNL	IPI	UniProtKB:P22607	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DBNL	IPI	UniProtKB:P42858	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DBNL	IPI	UniProtKB:P46379-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DBNL	IPI	UniProtKB:Q14957	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DBNL	IPI	UniProtKB:Q9UMX0	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Dbnl	IPI	PR:P52734	Mouse	PMID:12913069
Molecular Function	GO:0005515	protein binding	Dbnl	IPI	PR:Q91WK7	Mouse	PMID:19064729
Molecular Function	GO:0005515	protein binding	Dbnl	IPI	RGD:69264|RGD:628772	Rat	PMID:15014124|RGD:1599734
Molecular Function	GO:0019904	protein domain specific binding	Dbnl	IDA		Mouse	PMID:9630982
Molecular Function	GO:0098973	structural constituent of postsynaptic actin cytoskeleton	Dbnl	IDA		Rat	PMID:18829961|RGD:155230729
Molecular Function	GO:0098973	structural constituent of postsynaptic actin cytoskeleton	Dbnl	IMP		Rat	PMID:18829961|RGD:155230729
Cellular Component	GO:0005938	cell cortex	Dbnl	IDA		Mouse	PMID:12913069
Cellular Component	GO:0005737	cytoplasm	DBNL	IDA		Human	PMID:25468996
Cellular Component	GO:0005737	cytoplasm	Dbnl	IDA		Mouse	PMID:10637315
Cellular Component	GO:0005737	cytoplasm	Dbnl	IDA		Mouse	PMID:12913069
Cellular Component	GO:0030425	dendrite	Dbnl	IDA		Rat	PMID:11595038|RGD:70709
Cellular Component	GO:0070062	extracellular exosome	DBNL	HDA		Human	PMID:19056867
Cellular Component	GO:0098978	glutamatergic synapse	Dbnl	IDA		Rat	PMID:11595038|RGD:70709
Cellular Component	GO:0098978	glutamatergic synapse	Dbnl	IDA		Rat	PMID:18829961|RGD:155230729
Cellular Component	GO:0098978	glutamatergic synapse	Dbnl	IMP		Rat	PMID:18829961|RGD:155230729
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	DBNL	IDA		Human	GO_REF:0000052
Cellular Component	GO:0030027	lamellipodium	Dbnl	IDA		Mouse	PMID:10637315
Cellular Component	GO:0030027	lamellipodium	Dbnl	IDA		Mouse	PMID:12913069
Cellular Component	GO:0005886	plasma membrane	DBNL	IDA		Human	GO_REF:0000052
Cellular Component	GO:0002102	podosome	Dbnl	IDA		Mouse	MGI:MGI:5487508|PMID:22303001
Cellular Component	GO:0098794	postsynapse	Dbnl	IDA		Rat	PMID:11595038|RGD:70709
Cellular Component	GO:0014069	postsynaptic density	Dbnl	IDA		Rat	PMID:15014124|RGD:1599734
Cellular Component	GO:0098793	presynapse	Dbnl	IDA		Rat	PMID:11595038|RGD:70709
Cellular Component	GO:0001726	ruffle	Dbnl	IDA		Mouse	MGI:MGI:2671745|PMID:12913069
Biological Process	GO:0048812	neuron projection morphogenesis	Dbnl	IMP		Mouse	MGI:MGI:5486540|PMID:18829961
Biological Process	GO:0071800	podosome assembly	Dbnl	IMP		Mouse	MGI:MGI:5487508|PMID:22303001
Biological Process	GO:0098974	postsynaptic actin cytoskeleton organization	Dbnl	IDA		Rat	PMID:18829961|RGD:155230729
Biological Process	GO:0098974	postsynaptic actin cytoskeleton organization	Dbnl	IMP		Rat	PMID:18829961|RGD:155230729
Biological Process	GO:0016601	Rac protein signal transduction	Dbnl	IDA		Mouse	PMID:10637315
Biological Process	GO:0007416	synapse assembly	Dbnl	IMP		Mouse	MGI:MGI:5486540|PMID:18829961

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern