Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes DBR1
  • Mouse genes Dbr1
  • Rat genes Dbr1
  • Zfish genes dbr1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Dbr1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003723	RNA binding	DBR1	HDA		Human	PMID:22658674
Molecular Function	GO:0008419	RNA lariat debranching enzyme activity	DBR1	IMP		Human	PMID:10982890
Molecular Function	GO:0008419	RNA lariat debranching enzyme activity	DBR1	IMP		Human	PMID:29474921
Molecular Function	GO:0008419	RNA lariat debranching enzyme activity	Dbr1	IDA		Mouse	PMID:10982890
Cellular Component	GO:0005654	nucleoplasm	DBR1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	DBR1	IDA		Human	PMID:10982890
Biological Process	GO:0000398	mRNA splicing, via spliceosome	Dbr1	IDA		Mouse	PMID:10982890
Biological Process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	Dbr1	IDA		Mouse	MGI:MGI:1890021|PMID:10982890
Biological Process	GO:0000375	RNA splicing, via transesterification reactions	DBR1	IMP		Human	PMID:10982890

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern