Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes DDX17
  • Mouse genes Ddx17
  • Rat genes Ddx17
  • Zfish genes ddx17
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ddx17

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0031490	chromatin DNA binding	Ddx17	IDA		Mouse	PMID:29431742
Molecular Function	GO:0106222	lncRNA binding	Ddx17	IPI	MGI:MGI:6278009	Mouse	PMID:30622218
Molecular Function	GO:0106222	lncRNA binding	Ddx17	IDA		Mouse	PMID:29431742
Molecular Function	GO:0005515	protein binding	DDX17	IPI	UniProtKB:Q9JKL7	Human	PMID:14559993
Molecular Function	GO:0005515	protein binding	DDX17	IPI	UniProtKB:P04637	Human	PMID:15660129
Molecular Function	GO:0005515	protein binding	DDX17	IPI	UniProtKB:Q15637	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	DDX17	IPI	UniProtKB:Q8TBB1	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	DDX17	IPI	UniProtKB:Q9H2U1	Human	PMID:18279852
Molecular Function	GO:0005515	protein binding	DDX17	IPI	UniProtKB:Q8K3Y6	Human	PMID:18334637
Molecular Function	GO:0005515	protein binding	DDX17	IPI	UniProtKB:Q9NQT5	Human	PMID:18334637
Molecular Function	GO:0005515	protein binding	DDX17	IPI	UniProtKB:Q8IU60	Human	PMID:21876179
Molecular Function	GO:0005515	protein binding	DDX17	IPI	UniProtKB:Q9NPI6	Human	PMID:21876179
Molecular Function	GO:0005515	protein binding	DDX17	IPI	UniProtKB:O94916	Human	PMID:22266867
Molecular Function	GO:0005515	protein binding	DDX17	IPI	UniProtKB:P17844	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	DDX17	IPI	UniProtKB:Q15637	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	DDX17	IPI	UniProtKB:Q8K3Y6	Human	PMID:22407013
Molecular Function	GO:0005515	protein binding	DDX17	IPI	UniProtKB:P17844	Human	PMID:24581491
Molecular Function	GO:0005515	protein binding	DDX17	IPI	UniProtKB:P46937	Human	PMID:24581491
Molecular Function	GO:0005515	protein binding	DDX17	IPI	UniProtKB:P31943	Human	PMID:24910439
Molecular Function	GO:0005515	protein binding	DDX17	IPI	UniProtKB:P19712:PRO_0000038050	Human	PMID:24965446
Molecular Function	GO:0005515	protein binding	DDX17	IPI	UniProtKB:P62993	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	DDX17	IPI	UniProtKB:Q13895	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	DDX17	IPI	UniProtKB:Q96T37	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	DDX17	IPI	UniProtKB:Q03468	Human	PMID:26030138
Molecular Function	GO:0005515	protein binding	DDX17	IPI	UniProtKB:Q15637	Human	PMID:26420826
Molecular Function	GO:0005515	protein binding	DDX17	IPI	UniProtKB:P98175	Human	PMID:26871637
Molecular Function	GO:0005515	protein binding	DDX17	IPI	UniProtKB:Q13882	Human	PMID:31980649
Molecular Function	GO:0005515	protein binding	DDX17	IPI	UniProtKB:O95995	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	DDX17	IPI	UniProtKB:P26196	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	DDX17	IPI	UniProtKB:P31943	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	DDX17	IPI	UniProtKB:P98175	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	DDX17	IPI	UniProtKB:Q13882	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	DDX17	IPI	UniProtKB:Q13895	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	DDX17	IPI	UniProtKB:Q8IVT4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	DDX17	IPI	UniProtKB:Q8TBB1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	DDX17	IPI	UniProtKB:Q13148	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Ddx17	IPI	UniProtKB:O35737	Mouse	MGI:MGI:5883203|PMID:24910439
Molecular Function	GO:0005515	protein binding	Ddx17	IPI	UniProtKB:P46938	Mouse	MGI:MGI:5574429|PMID:24581491
Molecular Function	GO:0003723	RNA binding	DDX17	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	DDX17	HDA		Human	PMID:22681889
Molecular Function	GO:0003713	transcription coactivator activity	DDX17	IDA		Human	PMID:17226766
Cellular Component	GO:0016020	membrane	DDX17	HDA		Human	PMID:19946888
Cellular Component	GO:0016607	nuclear speck	DDX17	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	DDX17	IDA		Human	PMID:24910439
Biological Process	GO:0000380	alternative mRNA splicing, via spliceosome	DDX17	IMP		Human	PMID:24275493
Biological Process	GO:0000380	alternative mRNA splicing, via spliceosome	DDX17	IMP		Human	PMID:24910439
Biological Process	GO:0000380	alternative mRNA splicing, via spliceosome	Ddx17	IMP		Mouse	MGI:MGI:5883203|PMID:24910439
Biological Process	GO:0030521	androgen receptor signaling pathway	DDX17	IMP		Human	PMID:24275493
Biological Process	GO:0001837	epithelial to mesenchymal transition	DDX17	IMP		Human	PMID:24910439
Biological Process	GO:0010467	gene expression	Ddx17	IMP		Mouse	PMID:29431742
Biological Process	GO:0030520	intracellular estrogen receptor signaling pathway	DDX17	IMP		Human	PMID:24275493
Biological Process	GO:0010586	miRNA metabolic process	DDX17	IMP		Human	PMID:27478153
Biological Process	GO:0061614	miRNA transcription	Ddx17	IMP		Mouse	MGI:MGI:5883203|PMID:24910439
Biological Process	GO:0045445	myoblast differentiation	Ddx17	IMP		Mouse	MGI:MGI:5883203|PMID:24910439
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	DDX17	IDA		Human	PMID:17226766
Biological Process	GO:0000381	regulation of alternative mRNA splicing, via spliceosome	DDX17	IMP		Human	PMID:23022728
Biological Process	GO:0000381	regulation of alternative mRNA splicing, via spliceosome	Ddx17	IDA		Mouse	MGI:MGI:5819339|PMID:23022728
Biological Process	GO:2001014	regulation of skeletal muscle cell differentiation	DDX17	IMP		Human	PMID:17011493
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	DDX17	IMP		Human	PMID:24275493

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern