Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes DDX3Y
  • Mouse genes Ddx3y
  • Rat genes Ddx3
  • Zfish genes ddx3xb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ddx3y

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Cellular Component	GO:0005829	cytosol	DDX3Y	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016020	membrane	DDX3Y	HDA		Human	PMID:19946888
Cellular Component	GO:0005654	nucleoplasm	DDX3Y	IDA		Human	GO_REF:0000052
Biological Process	GO:0007420	brain development	ddx3xb	IMP	ZFIN:ZDB-MRPHLNO-151109-9	Zfish	PMID:25533962
Biological Process	GO:0030593	neutrophil chemotaxis	ddx3xb	IGI	ZFIN:ZDB-GENE-030131-1565	Zfish	PMID:30373933
Biological Process	GO:0030593	neutrophil chemotaxis	ddx3xb	IMP		Zfish	PMID:30373933

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern