Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes DENR
  • Mouse genes Denr
  • Rat genes Denr
  • Zfish genes denr
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Denr

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	DENR	IPI	UniProtKB:Q9ULC4	Human	PMID:16169070
Molecular Function	GO:0005515	protein binding	DENR	IPI	UniProtKB:P0CG48	Human	PMID:16874301
Molecular Function	GO:0005515	protein binding	DENR	IPI	UniProtKB:Q9NX47	Human	PMID:16874301
Molecular Function	GO:0005515	protein binding	DENR	IPI	UniProtKB:P0CG48	Human	PMID:16936636
Molecular Function	GO:0005515	protein binding	DENR	IPI	UniProtKB:Q9NX47	Human	PMID:16936636
Molecular Function	GO:0005515	protein binding	DENR	IPI	UniProtKB:Q8WX92	Human	PMID:20195357
Molecular Function	GO:0005515	protein binding	DENR	IPI	UniProtKB:Q9ULC4	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	DENR	IPI	UniProtKB:Q9ULC4	Human	PMID:32296183
Biological Process	GO:0001731	formation of translation preinitiation complex	DENR	IDA		Human	PMID:20713520
Biological Process	GO:0075522	IRES-dependent viral translational initiation	DENR	IDA		Human	PMID:20713520
Biological Process	GO:0032790	ribosome disassembly	DENR	IDA		Human	PMID:20713520

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern