Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes DHX16
  • Mouse genes Dhx16
  • Rat genes Dhx16
  • Zfish genes dhx16
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Dhx16

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0060090	molecular adaptor activity	DHX16	IDA		Human	PMID:35263596
Molecular Function	GO:0038187	pattern recognition receptor activity	DHX16	IDA		Human	PMID:35263596
Molecular Function	GO:0005515	protein binding	DHX16	IPI	UniProtKB:Q13435	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	DHX16	IPI	UniProtKB:Q92620	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	DHX16	IPI	UniProtKB:Q92917	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	DHX16	IPI	UniProtKB:Q9HCS7	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	DHX16	IPI	UniProtKB:Q92917	Human	PMID:25296192
Molecular Function	GO:0005515	protein binding	DHX16	IPI	UniProtKB:Q92917	Human	PMID:28514442
Molecular Function	GO:0003723	RNA binding	DHX16	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	DHX16	HDA		Human	PMID:22681889
Molecular Function	GO:0043130	ubiquitin binding	DHX16	IDA		Human	PMID:35263596
Cellular Component	GO:0005737	cytoplasm	DHX16	IDA		Human	PMID:35263596
Cellular Component	GO:0005654	nucleoplasm	DHX16	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	DHX16	IDA		Human	PMID:20423332
Cellular Component	GO:0005634	nucleus	DHX16	IDA		Human	PMID:20423332
Cellular Component	GO:0005634	nucleus	DHX16	IDA		Human	PMID:25296192
Cellular Component	GO:0005634	nucleus	DHX16	IDA		Human	PMID:29360106
Cellular Component	GO:0005681	spliceosomal complex	DHX16	IDA		Human	PMID:25296192
Cellular Component	GO:0071005	U2-type precatalytic spliceosome	DHX16	IDA		Human	PMID:29360106
Biological Process	GO:0140374	antiviral innate immune response	DHX16	IDA		Human	PMID:35263596
Biological Process	GO:0035987	endodermal cell differentiation	dhx16	IMP	ZFIN:ZDB-GENO-110630-22	Zfish	PMID:21396359
Biological Process	GO:0000398	mRNA splicing, via spliceosome	DHX16	IMP		Human	PMID:20423332
Biological Process	GO:0000398	mRNA splicing, via spliceosome	DHX16	IMP		Human	PMID:25296192
Biological Process	GO:0000398	mRNA splicing, via spliceosome	DHX16	IDA		Human	PMID:29360106

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern