Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes DHX38
  • Mouse genes Dhx38
  • Rat genes Dhx38
  • Zfish genes dhx38
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Dhx38

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	DHX38	IPI	UniProtKB:Q9NYB0	Human	PMID:21044950
Molecular Function	GO:0005515	protein binding	DHX38	IPI	UniProtKB:O60231	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	DHX38	IPI	UniProtKB:P98175	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	DHX38	IPI	UniProtKB:Q92917	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	DHX38	IPI	UniProtKB:Q96RS6	Human	PMID:25036637
Molecular Function	GO:0003723	RNA binding	DHX38	HDA		Human	PMID:22681889
Cellular Component	GO:0071013	catalytic step 2 spliceosome	DHX38	IDA		Human	PMID:11991638
Cellular Component	GO:0016020	membrane	DHX38	HDA		Human	PMID:19946888
Biological Process	GO:0000398	mRNA splicing, via spliceosome	DHX38	IDA		Human	PMID:9524131

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern