Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes DMBT1
  • Mouse genes Dmbt1
  • Rat genes Dmbt1
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Dmbt1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	DMBT1	IPI	UniProtKB:Q8IWL2	Human	PMID:10101009
Molecular Function	GO:0005515	protein binding	DMBT1	IPI	UniProtKB:Q9BYG5	Human	PMID:14676191
Molecular Function	GO:0005515	protein binding	DMBT1	IPI	UniProtKB:P11226	Human	PMID:22811680
Molecular Function	GO:0005515	protein binding	Dmbt1	IPI	UniProtKB:P35247	Mouse	MGI:MGI:2670828|PMID:12884308
Molecular Function	GO:0035375	zymogen binding	Dmbt1	IDA		Mouse	MGI:MGI:4456949|PMID:15292166
Cellular Component	GO:0062023	collagen-containing extracellular matrix	Dmbt1	HDA		Mouse	MGI:MGI:6201834|PMID:22159717
Cellular Component	GO:0062023	collagen-containing extracellular matrix	Dmbt1	IDA		Rat	PMID:11121438|RGD:1599784
Cellular Component	GO:0005737	cytoplasm	DMBT1	IDA		Human	PMID:10485905
Cellular Component	GO:0070062	extracellular exosome	DMBT1	HDA		Human	PMID:19199708
Cellular Component	GO:0031012	extracellular matrix	Dmbt1	IDA		Mouse	PMID:15452149
Cellular Component	GO:0005615	extracellular space	DMBT1	HDA		Human	PMID:22664934
Cellular Component	GO:0019898	extrinsic component of membrane	Dmbt1	IDA		Mouse	MGI:MGI:1096067|PMID:9247472
Cellular Component	GO:0005622	intracellular anatomical structure	Dmbt1	IDA		Mouse	PMID:15452149
Cellular Component	GO:0030670	phagocytic vesicle membrane	DMBT1	IDA		Human	PMID:10485905
Cellular Component	GO:0042589	zymogen granule membrane	Dmbt1	IDA		Mouse	MGI:MGI:3851325|PMID:7876332
Biological Process	GO:0001824	blastocyst development	Dmbt1	IMP	MGI:MGI:3497714	Mouse	PMID:15452149
Biological Process	GO:0030154	cell differentiation	Dmbt1	IEP		Rat	PMID:12368192|RGD:632595
Biological Process	GO:0002065	columnar/cuboidal epithelial cell differentiation	Dmbt1	IDA		Mouse	PMID:15452149
Biological Process	GO:0050829	defense response to Gram-negative bacterium	Dmbt1	IDA		Mouse	MGI:MGI:2670828|PMID:12884308
Biological Process	GO:0050830	defense response to Gram-positive bacterium	Dmbt1	IDA		Mouse	MGI:MGI:2670828|PMID:12884308
Biological Process	GO:0001833	inner cell mass cell proliferation	Dmbt1	IDA		Mouse	PMID:15452149
Biological Process	GO:0030858	positive regulation of epithelial cell differentiation	Dmbt1	IDA		Mouse	PMID:15452149
Biological Process	GO:0009617	response to bacterium	Dmbt1	IEP		Mouse	PMID:23012479
Biological Process	GO:0043627	response to estrogen	Dmbt1	IEP		Rat	PMID:15564322|RGD:1599781
Biological Process	GO:0010033	response to organic substance	Dmbt1	IEP		Rat	PMID:12419858|RGD:1599782
Biological Process	GO:0009611	response to wounding	Dmbt1	IEP		Rat	PMID:12368192|RGD:632595
Biological Process	GO:0042246	tissue regeneration	Dmbt1	IEP		Rat	PMID:12368192|RGD:632595

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern