Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes DNER
  • Mouse genes Dner
  • Rat genes Dner
  • Zfish genes dner
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Dner

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005112	Notch binding	Dner	IPI	PR:Q01705	Mouse	PMID:15965470
Molecular Function	GO:0005515	protein binding	DNER	IPI	UniProtKB:P22892	Human	PMID:11950833
Molecular Function	GO:0005515	protein binding	DNER	IPI	UniProtKB:Q9NR12	Human	PMID:32296183
Cellular Component	GO:0030425	dendrite	DNER	IDA		Human	PMID:11950833
Cellular Component	GO:0030425	dendrite	Dner	IDA		Mouse	PMID:15965470
Cellular Component	GO:0005769	early endosome	DNER	IDA		Human	PMID:11950833
Cellular Component	GO:0043025	neuronal cell body	Dner	IDA		Mouse	PMID:15965470
Cellular Component	GO:0005886	plasma membrane	DNER	IDA		Human	PMID:11950833
Biological Process	GO:0007417	central nervous system development	DNER	IEP		Human	PMID:11950833
Biological Process	GO:0010001	glial cell differentiation	Dner	IDA		Mouse	PMID:15965470
Biological Process	GO:0010001	glial cell differentiation	Dner	IMP	MGI:MGI:3621906	Mouse	PMID:15965470
Biological Process	GO:0010001	glial cell differentiation	dner	IMP	ZFIN:ZDB-MRPHLNO-130502-3	Zfish	PMID:23328254
Biological Process	GO:0010001	glial cell differentiation	dner	IDA		Zfish	PMID:23328254
Biological Process	GO:0010001	glial cell differentiation	dner	IMP	ZFIN:ZDB-MRPHLNO-130502-4	Zfish	PMID:23328254
Biological Process	GO:0010001	glial cell differentiation	dner	IGI	ZFIN:ZDB-MRPHLNO-130503-1,ZFIN:ZDB-MRPHLNO-130503-2	Zfish	PMID:23328254
Biological Process	GO:0060253	negative regulation of glial cell proliferation	dner	IDA		Zfish	PMID:23328254
Biological Process	GO:2000178	negative regulation of neural precursor cell proliferation	dner	IMP	ZFIN:ZDB-MRPHLNO-130502-3	Zfish	PMID:23328254
Biological Process	GO:2000178	negative regulation of neural precursor cell proliferation	dner	IMP	ZFIN:ZDB-MRPHLNO-130502-4	Zfish	PMID:23328254
Biological Process	GO:2000178	negative regulation of neural precursor cell proliferation	dner	IDA		Zfish	PMID:23328254
Biological Process	GO:0022008	neurogenesis	dner	IDA		Zfish	PMID:23328254
Biological Process	GO:0022008	neurogenesis	dner	IGI	ZFIN:ZDB-MRPHLNO-130503-1,ZFIN:ZDB-MRPHLNO-130503-2	Zfish	PMID:23328254
Biological Process	GO:0022008	neurogenesis	dner	IMP	ZFIN:ZDB-MRPHLNO-130502-4	Zfish	PMID:23328254
Biological Process	GO:0022008	neurogenesis	dner	IMP	ZFIN:ZDB-MRPHLNO-130502-3	Zfish	PMID:23328254
Biological Process	GO:0007220	Notch receptor processing	Dner	IDA		Mouse	PMID:15965470
Biological Process	GO:0048741	skeletal muscle fiber development	Dner	IDA		Mouse	PMID:15965470

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern