Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes DR1
  • Mouse genes Dr1
  • Rat genes Dr1
  • Zfish genes dr1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Dr1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q9NRF9	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q14919	Human	PMID:18692475
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q9ULM3	Human	PMID:18838386
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q14919	Human	PMID:29997244
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q14919	Human	PMID:31467278
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q14919	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q9NRF9	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q13952-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q32MN6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q9NRF9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:A0A384ME25	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:A2RU56	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:O15381-5	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:O43615	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:O60506-4	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:O75446	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:O75604-3	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:O95563	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:P01106	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:P05067	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:P10073	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:P13928	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:P19388	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:P40337-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:P46379-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:P48730-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:P58304	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:P60896	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:P62701	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q13123	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q13191	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q14693	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q14919	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q15049	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q17RN3	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q3KNS6-3	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q494V2-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q53FD0-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q5T6S3	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q5TAQ9-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q6NXT2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q6P1L5	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q6XD76	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q86TI2-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q8IZU1	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q8N488	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q8NBB4-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q8NHS9	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q8TBE0	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q8TCT7-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q8TD91-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q92613	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q92615	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q92782-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q969K3	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q96D59	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q96IJ6	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q96LL4	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q96MN9-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q99873-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q9BSH4	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q9BUL9	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q9BVN2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q9BYU1	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q9H000	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q9H669	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q9H7T9	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q9H972-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q9HBQ8	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q9HCC6	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q9NRL3	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q9P0T4	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q9P2T0	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q9P2Y4	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q9UIH9	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q9Y4H4	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q9Y5P3	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q9Y6C2-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DR1	IPI	UniProtKB:Q14919	Human	PMID:8670811
Molecular Function	GO:0005515	protein binding	Dr1	IPI	PR:Q9JHD2	Mouse	PMID:19103755
Molecular Function	GO:0005515	protein binding	Dr1	IPI	PR:P61965	Mouse	PMID:19103755
Molecular Function	GO:0016251	RNA polymerase II general transcription initiation factor activity	DR1	IDA		Human	PMID:8670811
Molecular Function	GO:0017025	TBP-class protein binding	DR1	IDA		Human	PMID:18838386
Molecular Function	GO:0017025	TBP-class protein binding	DR1	IPI	UniProtKB:P20226	Human	PMID:8670811
Cellular Component	GO:0140672	ATAC complex	DR1	IDA		Human	PMID:19936620
Cellular Component	GO:0140672	ATAC complex	DR1	IDA		Human	PMID:18838386
Cellular Component	GO:0140672	ATAC complex	Dr1	IDA		Mouse	MGI:MGI:6827473|PMID:19936620
Cellular Component	GO:0005654	nucleoplasm	DR1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	Dr1	IDA		Mouse	PMID:19103755
Cellular Component	GO:0090575	RNA polymerase II transcription regulator complex	DR1	IDA		Human	PMID:8670811
Biological Process	GO:0043966	histone H3 acetylation	DR1	IDA		Human	PMID:18838386
Biological Process	GO:0044154	histone H3-K14 acetylation	DR1	IDA		Human	PMID:19936620
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	DR1	IDA		Human	PMID:8670811
Biological Process	GO:0051726	regulation of cell cycle	DR1	IMP		Human	PMID:19103755
Biological Process	GO:0051726	regulation of cell cycle	Dr1	IMP		Mouse	MGI:MGI:3835889|PMID:19103755
Biological Process	GO:0051302	regulation of cell division	DR1	IDA		Human	PMID:20562830
Biological Process	GO:0051302	regulation of cell division	Dr1	IDA		Mouse	MGI:MGI:4462728|PMID:20562830
Biological Process	GO:0006355	regulation of DNA-templated transcription	DR1	IMP		Human	PMID:19936620
Biological Process	GO:0045995	regulation of embryonic development	Dr1	IDA		Mouse	MGI:MGI:3835889|PMID:19103755
Biological Process	GO:0031063	regulation of histone deacetylation	DR1	IMP		Human	PMID:20562830
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	DR1	IDA		Human	PMID:22055187
Biological Process	GO:0090043	regulation of tubulin deacetylation	DR1	IMP		Human	PMID:20562830

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern