Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes DTNA
  • Mouse genes Dtna
  • Rat genes Dtna
  • Zfish genes dtna
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Dtna

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0030165	PDZ domain binding	Dtna	IPI	RGD:621660	Rat	PMID:15024025|RGD:1581350
Molecular Function	GO:0019902	phosphatase binding	Dtna	IDA		Rat	PMID:17610895|RGD:126781731
Molecular Function	GO:0005515	protein binding	DTNA	IPI	UniProtKB:P11532	Human	PMID:10767429
Molecular Function	GO:0005515	protein binding	DTNA	IPI	UniProtKB:P46939	Human	PMID:10767429
Molecular Function	GO:0005515	protein binding	DTNA	IPI	UniProtKB:O15061	Human	PMID:11353857
Molecular Function	GO:0005515	protein binding	DTNA	IPI	UniProtKB:Q15049	Human	PMID:19931615
Molecular Function	GO:0005515	protein binding	DTNA	IPI	UniProtKB:Q9UBT7	Human	PMID:21115837
Molecular Function	GO:0005515	protein binding	DTNA	IPI	UniProtKB:P11532	Human	PMID:9356463
Molecular Function	GO:0005515	protein binding	Dtna	IPI	UniProtKB:Q91WZ8	Mouse	MGI:MGI:2136481|PMID:11316798
Molecular Function	GO:0005515	protein binding	Dtna	IPI	UniProtKB:Q6PCZ4	Mouse	MGI:MGI:3037508|PMID:14623885
Molecular Function	GO:0005515	protein binding	Dtna	IPI	RGD:621890	Rat	PMID:10984432|RGD:1581691
Molecular Function	GO:0005515	protein binding	Dtna	IPI	UniProtKB:P12368	Rat	PMID:17610895|RGD:126781731
Molecular Function	GO:0005515	protein binding	Dtna	IPI	UniProtKB:P12369	Rat	PMID:17610895|RGD:126781731
Molecular Function	GO:0005515	protein binding	Dtna	IPI	UniProtKB:Q15049	Rat	PMID:19931615|RGD:2326037
Cellular Component	GO:0030424	axon	Dtna	IDA		Rat	PMID:11053293|RGD:1581690
Cellular Component	GO:0030054	cell junction	DTNA	IDA		Human	GO_REF:0000052
Cellular Component	GO:0042995	cell projection	Dtna	IDA		Rat	PMID:10739890|RGD:1581692
Cellular Component	GO:0005737	cytoplasm	Dtna	IDA		Rat	PMID:11053293|RGD:1581690
Cellular Component	GO:0031234	extrinsic component of cytoplasmic side of plasma membrane	Dtna	IDA		Rat	PMID:11053293|RGD:1581690
Cellular Component	GO:0045111	intermediate filament cytoskeleton	DTNA	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	DTNA	IDA		Human	GO_REF:0000052
Cellular Component	GO:0032991	protein-containing complex	DTNA	IDA		Human	PMID:18468998
Cellular Component	GO:0042383	sarcolemma	Dtna	IDA		Rat	PMID:12416719|RGD:1566576
Cellular Component	GO:0045202	synapse	Dtna	IDA		Mouse	PMID:10995443

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern