Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes DUT
  • Mouse genes Dut
  • Rat genes Dut
  • Zfish genes dut
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Dut

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004170	dUTP diphosphatase activity	DUT	IDA		Human	PMID:8631816
Molecular Function	GO:0004170	dUTP diphosphatase activity	Dut	IDA		Rat	PMID:1315924|RGD:2301218
Molecular Function	GO:0004170	dUTP diphosphatase activity	Dut	IDA		Rat	PMID:3032103|RGD:2300191
Molecular Function	GO:0042802	identical protein binding	Dut	IPI	RGD:620849	Rat	PMID:3032103|RGD:2300191
Molecular Function	GO:0042975	peroxisome proliferator activated receptor binding	Dut	IPI	RGD:3369	Rat	PMID:8910358|RGD:728628
Molecular Function	GO:0005515	protein binding	DUT	IPI	UniProtKB:Q6ZVK8	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	DUT	IPI	UniProtKB:Q6ZVK8	Human	PMID:19060904
Molecular Function	GO:0032556	pyrimidine deoxyribonucleotide binding	Dut	IDA		Rat	PMID:3032103|RGD:2300191
Molecular Function	GO:0003723	RNA binding	DUT	HDA		Human	PMID:22658674
Molecular Function	GO:0030547	signaling receptor inhibitor activity	Dut	IDA		Rat	PMID:8910358|RGD:728628
Cellular Component	GO:0005737	cytoplasm	Dut	IDA		Rat	PMID:8910358|RGD:728628
Cellular Component	GO:0005829	cytosol	Dut	IDA		Rat	PMID:1315924|RGD:2301218
Cellular Component	GO:0070062	extracellular exosome	DUT	HDA		Human	PMID:20458337
Cellular Component	GO:0005739	mitochondrion	Dut	HDA		Mouse	PMID:14651853
Cellular Component	GO:0005739	mitochondrion	Dut	HDA		Mouse	PMID:18614015
Cellular Component	GO:0005654	nucleoplasm	DUT	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	DUT	IDA		Human	PMID:8631816
Cellular Component	GO:0005634	nucleus	Dut	IDA		Rat	PMID:8910358|RGD:728628
Biological Process	GO:0006231	dTMP biosynthetic process	DUT	IDA		Human	PMID:10952785
Biological Process	GO:0006231	dTMP biosynthetic process	DUT	IDA		Human	PMID:15322254
Biological Process	GO:0006226	dUMP biosynthetic process	Dut	IDA		Rat	PMID:1315924|RGD:2301218
Biological Process	GO:0006226	dUMP biosynthetic process	Dut	IDA		Rat	PMID:3032103|RGD:2300191
Biological Process	GO:0046081	dUTP catabolic process	Dut	IDA		Rat	PMID:1315924|RGD:2301218
Biological Process	GO:0046081	dUTP catabolic process	Dut	IDA		Rat	PMID:3032103|RGD:2300191
Biological Process	GO:0001889	liver development	Dut	IEP		Rat	PMID:11121581|RGD:5133681
Biological Process	GO:0043254	regulation of protein-containing complex assembly	Dut	IDA		Rat	PMID:8910358|RGD:728628
Biological Process	GO:0014070	response to organic cyclic compound	Dut	IEP		Rat	PMID:2841940|RGD:5133682

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern