Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ECD
  • Mouse genes Ecd
  • Rat genes Ecd
  • Zfish genes ecd
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ecd

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0035035	histone acetyltransferase binding	ECD	IDA		Human	PMID:19919181
Molecular Function	GO:0005515	protein binding	ECD	IPI	UniProtKB:Q9H3M7	Human	PMID:23880345
Molecular Function	GO:0005515	protein binding	ECD	IPI	UniProtKB:P0CE12	Human	PMID:23935490
Molecular Function	GO:0005515	protein binding	ECD	IPI	UniProtKB:Q9NWS0	Human	PMID:24656813
Molecular Function	GO:0005515	protein binding	ECD	IPI	UniProtKB:Q6P2Q9	Human	PMID:26711270
Molecular Function	GO:0005515	protein binding	ECD	IPI	UniProtKB:Q9NWS0	Human	PMID:26711270
Molecular Function	GO:0005515	protein binding	ECD	IPI	UniProtKB:Q9Y265	Human	PMID:26711270
Molecular Function	GO:0005515	protein binding	ECD	IPI	UniProtKB:Q6P2Q9	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	ECD	IPI	UniProtKB:Q9Y5U2	Human	PMID:34131137
Molecular Function	GO:0005515	protein binding	Ecd	IPI	UniProtKB:Q9R000	Mouse	MGI:MGI:3795638|PMID:18474241
Molecular Function	GO:0005515	protein binding	Ecd	IPI	PR:P13405	Mouse	PMID:19640839
Cellular Component	GO:0005737	cytoplasm	ECD	IDA		Human	PMID:19919181
Cellular Component	GO:0005829	cytosol	ECD	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	ECD	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	ECD	IDA		Human	PMID:19919181
Biological Process	GO:0048144	fibroblast proliferation	Ecd	IMP	MGI:MGI:4414760	Mouse	PMID:19640839
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	ECD	IDA		Human	PMID:19919181
Biological Process	GO:2000045	regulation of G1/S transition of mitotic cell cycle	Ecd	IMP	MGI:MGI:4414760	Mouse	PMID:19640839

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern