Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes EEFSEC
  • Mouse genes Eefsec
  • Rat genes Eefsec
  • Zfish genes eefsec
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Eefsec

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005525	GTP binding	Eefsec	IDA		Mouse	PMID:11265756
Molecular Function	GO:0005525	GTP binding	Eefsec	IDA		Mouse	PMID:10970870
Molecular Function	GO:0003924	GTPase activity	Eefsec	IDA		Mouse	PMID:22992746
Molecular Function	GO:0005515	protein binding	Eefsec	IPI	MGI:MGI:1922670	Mouse	PMID:22992746
Molecular Function	GO:0043021	ribonucleoprotein complex binding	Eefsec	IDA		Mouse	PMID:22992746
Molecular Function	GO:0035368	selenocysteine insertion sequence binding	Eefsec	IDA		Mouse	PMID:22992746
Molecular Function	GO:0003746	translation elongation factor activity	Eefsec	IDA		Mouse	PMID:22992746
Molecular Function	GO:0000049	tRNA binding	Eefsec	IDA		Mouse	PMID:22992746
Molecular Function	GO:0000049	tRNA binding	Eefsec	IDA		Mouse	PMID:11265756
Molecular Function	GO:0000049	tRNA binding	Eefsec	IDA		Mouse	PMID:16508009
Molecular Function	GO:0000049	tRNA binding	Eefsec	IDA		Mouse	PMID:10970870
Cellular Component	GO:0005739	mitochondrion	Eefsec	HDA		Mouse	PMID:18614015
Cellular Component	GO:1990904	ribonucleoprotein complex	Eefsec	IDA		Mouse	PMID:22992746
Biological Process	GO:0001514	selenocysteine incorporation	Eefsec	IMP	MGI:MGI:1857940	Mouse	PMID:11890935
Biological Process	GO:0001514	selenocysteine incorporation	Eefsec	IDA		Mouse	PMID:11265756
Biological Process	GO:0001514	selenocysteine incorporation	Eefsec	IDA		Mouse	PMID:10970870
Biological Process	GO:0001514	selenocysteine incorporation	Eefsec	IMP	MGI:MGI:2151801	Mouse	PMID:10992298
Biological Process	GO:0001514	selenocysteine incorporation	Eefsec	IMP		Mouse	PMID:22992746

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern