Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes EFTUD2
  • Mouse genes Eftud2
  • Rat genes Eftud2
  • Zfish genes eftud2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Eftud2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	EFTUD2	IPI	UniProtKB:Q6P2Q9	Human	PMID:16723661
Molecular Function	GO:0005515	protein binding	EFTUD2	IPI	UniProtKB:P01106	Human	PMID:17314511
Molecular Function	GO:0005515	protein binding	EFTUD2	IPI	UniProtKB:Q9BQA5	Human	PMID:17577209
Molecular Function	GO:0005515	protein binding	EFTUD2	IPI	UniProtKB:Q15303	Human	PMID:20858735
Molecular Function	GO:0005515	protein binding	EFTUD2	IPI	UniProtKB:P04792	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	EFTUD2	IPI	UniProtKB:Q13123	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	EFTUD2	IPI	UniProtKB:Q15427	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	EFTUD2	IPI	UniProtKB:P52298,UniProtKB:Q09161	Human	PMID:23793891
Molecular Function	GO:0005515	protein binding	EFTUD2	IPI	UniProtKB:Q96DI7	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	EFTUD2	IPI	UniProtKB:Q9H7Z3	Human	PMID:30538148
Molecular Function	GO:0005515	protein binding	EFTUD2	IPI	UniProtKB:Q14320	Human	PMID:32703943
Molecular Function	GO:0005515	protein binding	EFTUD2	IPI	UniProtKB:Q6P2Q9	Human	PMID:9774689
Molecular Function	GO:0005515	protein binding	EFTUD2	IPI	UniProtKB:Q96DI7	Human	PMID:9774689
Molecular Function	GO:0005515	protein binding	Eftud2	IPI	PR:P48678	Mouse	PMID:11739632
Molecular Function	GO:0003723	RNA binding	EFTUD2	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	EFTUD2	HDA		Human	PMID:22681889
Cellular Component	GO:0015030	Cajal body	EFTUD2	IDA		Human	PMID:15257298
Cellular Component	GO:0071013	catalytic step 2 spliceosome	EFTUD2	IDA		Human	PMID:11991638
Cellular Component	GO:0005829	cytosol	EFTUD2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	EFTUD2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016020	membrane	EFTUD2	HDA		Human	PMID:19946888
Cellular Component	GO:0016607	nuclear speck	EFTUD2	IDA		Human	PMID:15257298
Cellular Component	GO:0005654	nucleoplasm	EFTUD2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	EFTUD2	IDA		Human	PMID:28076346
Cellular Component	GO:0005634	nucleus	Eftud2	IDA		Mouse	PMID:11739632
Cellular Component	GO:0071007	U2-type catalytic step 2 spliceosome	EFTUD2	IDA		Human	PMID:28076346
Cellular Component	GO:0071005	U2-type precatalytic spliceosome	EFTUD2	IDA		Human	PMID:29361316
Cellular Component	GO:0046540	U4/U6 x U5 tri-snRNP complex	EFTUD2	IPI		Human	PMID:30975767
Cellular Component	GO:0046540	U4/U6 x U5 tri-snRNP complex	EFTUD2	IDA		Human	PMID:23793891
Biological Process	GO:0043010	camera-type eye development	eftud2	IMP	ZFIN:ZDB-GENO-160129-9	Zfish	PMID:26118977
Biological Process	GO:0071466	cellular response to xenobiotic stimulus	Eftud2	IEP		Rat	PMID:24793618|RGD:10045571
Biological Process	GO:0060322	head development	eftud2	IMP	ZFIN:ZDB-GENO-160129-9	Zfish	PMID:26118977
Biological Process	GO:0000398	mRNA splicing, via spliceosome	EFTUD2	IDA		Human	PMID:28076346
Biological Process	GO:0000398	mRNA splicing, via spliceosome	eftud2	IMP	ZFIN:ZDB-GENO-170630-1	Zfish	PMID:27899647
Biological Process	GO:0048666	neuron development	eftud2	IMP	ZFIN:ZDB-GENO-170630-1	Zfish	PMID:27899647
Biological Process	GO:0045664	regulation of neuron differentiation	eftud2	IMP	ZFIN:ZDB-GENO-170630-1	Zfish	PMID:27899647
Biological Process	GO:0042220	response to cocaine	Eftud2	IEP		Rat	PMID:20187946|RGD:10045569

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern