Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ELOC
  • Mouse genes Eloc
  • Rat genes Eloc,LOC103694416
  • Zfish genes eloca,elocb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Eloc

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:Q15370	Human	PMID:10205047
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:Q9V3C1	Human	PMID:10851083
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:Q15370	Human	PMID:12004076
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:Q15370	Human	PMID:12050673
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:Q15370	Human	PMID:12149480
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:Q96G25	Human	PMID:12149480
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:O75159	Human	PMID:15590694
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:Q13617	Human	PMID:15601820
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:Q96A44	Human	PMID:15601820
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:Q99619	Human	PMID:15601820
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:Q15370	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:O14508	Human	PMID:16643902
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:O15524	Human	PMID:16643902
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:O15524	Human	PMID:17183367
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:Q13617	Human	PMID:17183367
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:Q8N668	Human	PMID:17183367
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:O14508	Human	PMID:19159283
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:Q96A44	Human	PMID:19159283
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:Q99619	Human	PMID:19159283
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:O41974	Human	PMID:19322197
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:Q13617	Human	PMID:19327355
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:Q15370	Human	PMID:20211142
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:Q96DX5	Human	PMID:20211142
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:Q96Q27	Human	PMID:21119685
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:Q13617	Human	PMID:21145461
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:Q13618	Human	PMID:21145461
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:Q96A44	Human	PMID:21199876
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:Q96BD6	Human	PMID:21199876
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:Q99619	Human	PMID:21199876
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:Q15370	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:Q13618	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:P12504	Human	PMID:22190034
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:Q13617	Human	PMID:23563313
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:Q8N668	Human	PMID:23563313
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:Q15370	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:Q5VZV1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:Q96DX5	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:Q5VZV1	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:O15524	Human	PMID:31980649
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:Q15370	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ELOC	IPI	UniProtKB:Q5VZV1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Eloc	IPI	UniProtKB:A1Z6E0	Mouse	MGI:MGI:5499725|PMID:16498413
Molecular Function	GO:0005515	protein binding	Eloc	IPI	PR:O35718	Mouse	PMID:15601820
Molecular Function	GO:0005515	protein binding	Eloc	IPI	PR:P40338	Mouse	PMID:15601820
Molecular Function	GO:0044877	protein-containing complex binding	Eloc	IPI	RGD:1310644|RGD:1308453|RGD:3960|RGD:621200	Rat	PMID:10213691|RGD:2301042
Molecular Function	GO:0001222	transcription corepressor binding	ELOC	IPI	UniProtKB:P40337	Human	PMID:7660122
Cellular Component	GO:0031466	Cul5-RING ubiquitin ligase complex	ELOC	IDA		Human	PMID:30166453
Cellular Component	GO:0070449	elongin complex	ELOC	IDA		Human	PMID:7660122
Cellular Component	GO:0070449	elongin complex	Eloc	IDA		Mouse	MGI:MGI:5499725|PMID:16498413
Cellular Component	GO:0030891	VCB complex	Eloc	IDA		Rat	PMID:10213691|RGD:2301042
Biological Process	GO:0032968	positive regulation of transcription elongation by RNA polymerase II	Eloc	IDA		Rat	PMID:8202474|RGD:730008
Biological Process	GO:0016567	protein ubiquitination	ELOC	IDA		Human	PMID:30166453
Biological Process	GO:0140958	target-directed miRNA degradation	ELOC	IMP		Human	PMID:33184237
Biological Process	GO:0006367	transcription initiation at RNA polymerase II promoter	ELOC	IDA		Human	PMID:7660122

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern