Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes EMILIN3
  • Mouse genes Emilin3
  • Rat genes Emilin3
  • Zfish genes emilin3a
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Emilin3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	EMILIN3	IPI	UniProtKB:Q9NT22	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	EMILIN3	IPI	UniProtKB:O00560	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	EMILIN3	IPI	UniProtKB:O75934	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	EMILIN3	IPI	UniProtKB:Q2TAC2-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	EMILIN3	IPI	UniProtKB:Q96HA8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	EMILIN3	IPI	UniProtKB:Q9H8Y8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	EMILIN3	IPI	UniProtKB:Q9NVF7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	EMILIN3	IPI	UniProtKB:Q9Y316	Human	PMID:32296183
Cellular Component	GO:0062023	collagen-containing extracellular matrix	EMILIN3	HDA		Human	PMID:25037231
Cellular Component	GO:0005737	cytoplasm	Emilin3	IDA		Mouse	PMID:14706625
Biological Process	GO:0055001	muscle cell development	emilin3a	IGI	ZFIN:ZDB-MRPHLNO-140114-6,ZFIN:ZDB-MRPHLNO-140114-7	Zfish	PMID:24131633
Biological Process	GO:0055001	muscle cell development	emilin3a	IGI	ZFIN:ZDB-MRPHLNO-050510-1,ZFIN:ZDB-MRPHLNO-140114-6,ZFIN:ZDB-MRPHLNO-140114-7	Zfish	PMID:24131633
Biological Process	GO:0048570	notochord morphogenesis	emilin3a	IGI	ZFIN:ZDB-MRPHLNO-140114-3,ZFIN:ZDB-MRPHLNO-140114-5	Zfish	PMID:24131633
Biological Process	GO:0048570	notochord morphogenesis	emilin3a	IGI	ZFIN:ZDB-MRPHLNO-140114-6,ZFIN:ZDB-MRPHLNO-140114-7	Zfish	PMID:24131633
Biological Process	GO:0008589	regulation of smoothened signaling pathway	emilin3a	IGI	ZFIN:ZDB-MRPHLNO-140114-6,ZFIN:ZDB-MRPHLNO-140114-7	Zfish	PMID:24131633

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern