Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes EMX1
  • Mouse genes Emx1
  • Rat genes Emx1
  • Zfish genes emx1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Emx1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	EMX1	IPI	UniProtKB:Q9BZH6	Human	PMID:20887964
Molecular Function	GO:0005515	protein binding	EMX1	IPI	UniProtKB:P10071,UniProtKB:Q9BZH6	Human	PMID:29263200
Molecular Function	GO:0005515	protein binding	EMX1	IPI	UniProtKB:P10071:PRO_0000406137	Human	PMID:29263200
Molecular Function	GO:0005515	protein binding	EMX1	IPI	UniProtKB:Q9BZH6	Human	PMID:29263200
Molecular Function	GO:0005515	protein binding	Emx1	IPI	UniProtKB:Q61602,UniProtKB:Q8K1X1	Mouse	MGI:MGI:6116377|PMID:29263200
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	EMX1	IDA		Human	PMID:28473536
Cellular Component	GO:0005694	chromosome	EMX1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005730	nucleolus	EMX1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	EMX1	IDA		Human	PMID:20887964
Cellular Component	GO:0005634	nucleus	Emx1	IDA		Mouse	MGI:MGI:6116377|PMID:29263200
Biological Process	GO:0007420	brain development	Emx1	IMP	MGI:MGI:2136349	Mouse	PMID:12091317
Biological Process	GO:0007420	brain development	Emx1	IMP	MGI:MGI:1857433	Mouse	PMID:12561075
Biological Process	GO:0048854	brain morphogenesis	Emx1	IGI	MGI:MGI:2682313	Mouse	PMID:23178126
Biological Process	GO:0048854	brain morphogenesis	Emx1	IGI	MGI:MGI:88355	Mouse	PMID:25100583
Biological Process	GO:0048854	brain morphogenesis	Emx1	IGI	MGI:MGI:1314653	Mouse	PMID:25100583
Biological Process	GO:0021987	cerebral cortex development	Emx1	IGI	MGI:MGI:95388	Mouse	PMID:12764040
Biological Process	GO:0021987	cerebral cortex development	Emx1	IMP	MGI:MGI:1928281	Mouse	PMID:16892058
Biological Process	GO:0021987	cerebral cortex development	Emx1	IGI	MGI:MGI:88355	Mouse	PMID:25100583
Biological Process	GO:0021987	cerebral cortex development	Emx1	IGI	MGI:MGI:1314653	Mouse	PMID:25100583
Biological Process	GO:0021895	cerebral cortex neuron differentiation	Emx1	IGI	MGI:MGI:2682313	Mouse	PMID:23178126
Biological Process	GO:0021796	cerebral cortex regionalization	Emx1	IGI	MGI:MGI:95388	Mouse	PMID:15147765
Biological Process	GO:0048872	homeostasis of number of cells	Emx1	IGI	MGI:MGI:1314653	Mouse	PMID:25100583
Biological Process	GO:0048872	homeostasis of number of cells	Emx1	IGI	MGI:MGI:88355	Mouse	PMID:25100583
Biological Process	GO:0001701	in utero embryonic development	Emx1	IGI	MGI:MGI:894681	Mouse	PMID:23861879
Biological Process	GO:0060563	neuroepithelial cell differentiation	Emx1	IGI	MGI:MGI:88355	Mouse	PMID:25100583
Biological Process	GO:0060563	neuroepithelial cell differentiation	Emx1	IGI	MGI:MGI:1314653	Mouse	PMID:25100583
Biological Process	GO:0030182	neuron differentiation	Emx1	IMP	MGI:MGI:1857433	Mouse	PMID:12561075
Biological Process	GO:1990138	neuron projection extension	Emx1	IGI	MGI:MGI:894681	Mouse	PMID:23861879
Biological Process	GO:0009791	post-embryonic development	Emx1	IMP	MGI:MGI:1928281	Mouse	PMID:16892058
Biological Process	GO:0035777	pronephric distal tubule development	emx1	IGI	ZFIN:ZDB-GENE-990726-27	Zfish	PMID:30575756
Biological Process	GO:0035777	pronephric distal tubule development	emx1	IGI	ZFIN:ZDB-GENE-050208-123	Zfish	PMID:30575756
Biological Process	GO:0035777	pronephric distal tubule development	emx1	IMP	ZFIN:ZDB-MRPHLNO-190523-1,ZFIN:ZDB-MRPHLNO-190523-2	Zfish	PMID:30575756
Biological Process	GO:0060019	radial glial cell differentiation	Emx1	IGI	MGI:MGI:88355	Mouse	PMID:25100583
Biological Process	GO:0060019	radial glial cell differentiation	Emx1	IGI	MGI:MGI:1314653	Mouse	PMID:25100583
Biological Process	GO:0070445	regulation of oligodendrocyte progenitor proliferation	Emx1	IGI	MGI:MGI:88355	Mouse	PMID:25100583
Biological Process	GO:0070445	regulation of oligodendrocyte progenitor proliferation	Emx1	IGI	MGI:MGI:1314653	Mouse	PMID:25100583
Biological Process	GO:0009410	response to xenobiotic stimulus	Emx1	IDA		Mouse	PMID:9098922
Biological Process	GO:0021537	telencephalon development	Emx1	IGI	MGI:MGI:88355	Mouse	PMID:25100583
Biological Process	GO:0021537	telencephalon development	Emx1	IGI	MGI:MGI:1314653	Mouse	PMID:25100583

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern