Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ENDOV
  • Mouse genes Endov
  • Rat genes Endov
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Endov

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003677	DNA binding	ENDOV	IDA		Human	PMID:23139746
Molecular Function	GO:0016888	endodeoxyribonuclease activity, producing 5'-phosphomonoesters	Endov	IDA		Mouse	MGI:MGI:5009179|PMID:12853604
Molecular Function	GO:0000287	magnesium ion binding	Endov	IDA		Mouse	MGI:MGI:5009179|PMID:12853604
Molecular Function	GO:0005515	protein binding	ENDOV	IPI	UniProtKB:P11940	Human	PMID:27573237
Molecular Function	GO:0016891	RNA endonuclease activity, producing 5'-phosphomonoesters	ENDOV	IDA		Human	PMID:23912683
Molecular Function	GO:0016891	RNA endonuclease activity, producing 5'-phosphomonoesters	ENDOV	IDA		Human	PMID:23912718
Molecular Function	GO:0016891	RNA endonuclease activity, producing 5'-phosphomonoesters	ENDOV	IDA		Human	PMID:27573237
Molecular Function	GO:0003727	single-stranded RNA binding	ENDOV	IDA		Human	PMID:23912683
Molecular Function	GO:0003727	single-stranded RNA binding	ENDOV	IDA		Human	PMID:23912718
Cellular Component	GO:0005737	cytoplasm	ENDOV	IDA		Human	PMID:23139746
Cellular Component	GO:0005737	cytoplasm	ENDOV	IDA		Human	PMID:23912718
Cellular Component	GO:0005730	nucleolus	ENDOV	IDA		Human	PMID:23139746
Biological Process	GO:0006281	DNA repair	Endov	IDA		Mouse	MGI:MGI:5009179|PMID:12853604

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern