Comparative GO Graph (mouse, human, rat, zebrafish)

Source

Alliance of Genome Resources

Compare experimental GO annotations for Human-Mouse-Rat-Zebrafish orthologs to Mouse Esrrb

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

This class contains
- Human genes ESRRB
- Mouse genes Esrrb
- Rat genes Esrrb
- Zfish genes esrrb
Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Esrrb

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0000987	cis-regulatory region sequence-specific DNA binding	Esrrb	IDA		Mouse	MGI:MGI:5529430\|PMID:23508100
Molecular Function	GO:0000987	cis-regulatory region sequence-specific DNA binding	Esrrb	IDA		Mouse	MGI:MGI:5887187\|PMID:26206133
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	Esrrb	IDA		Mouse	MGI:MGI:5882883\|PMID:18957414
Molecular Function	GO:0003700	DNA-binding transcription factor activity	Esrrb	IDA		Mouse	MGI:MGI:5824766\|PMID:27601327
Molecular Function	GO:0003700	DNA-binding transcription factor activity	Esrrb	IDA		Mouse	MGI:MGI:3813404\|PMID:18662995
Molecular Function	GO:0003700	DNA-binding transcription factor activity	Esrrb	IDA		Mouse	MGI:MGI:5529430\|PMID:23508100
Molecular Function	GO:0003700	DNA-binding transcription factor activity	Esrrb	IDA		Mouse	MGI:MGI:5887187\|PMID:26206133
Molecular Function	GO:0003700	DNA-binding transcription factor activity	Esrrb	IDA		Mouse	MGI:MGI:5882869\|PMID:23169531
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	Esrrb	IMP		Mouse	MGI:MGI:5823092\|PMID:27723719
Molecular Function	GO:0003676	nucleic acid binding	ESRRB	EXP		Human	PMID:9218433
Molecular Function	GO:0005515	protein binding	Esrrb	IPI	UniProtKB:Q16665	Mouse	MGI:MGI:6093244\|PMID:18509053
Molecular Function	GO:0005515	protein binding	Esrrb	IPI	UniProtKB:Q62315	Mouse	MGI:MGI:5887185\|PMID:26523946
Molecular Function	GO:0005515	protein binding	Esrrb	IPI	UniProtKB:Q61066	Mouse	MGI:MGI:5824766\|PMID:27601327
Molecular Function	GO:0005515	protein binding	Esrrb	IPI	UniProtKB:Q61066	Mouse	MGI:MGI:5529430\|PMID:23508100
Molecular Function	GO:0005515	protein binding	Esrrb	IPI	UniProtKB:Q80Z64	Mouse	MGI:MGI:5882883\|PMID:18957414
Molecular Function	GO:0005515	protein binding	Esrrb	IPI	UniProtKB:Q61066\|UniProtKB:Q6ZQ88	Mouse	MGI:MGI:5887187\|PMID:26206133
Molecular Function	GO:0005515	protein binding	Esrrb	IPI	UniProtKB:Q3UNW5\|UniProtKB:Q61066\|UniProtKB:Q9R190	Mouse	MGI:MGI:5320277\|PMID:20362541
Molecular Function	GO:0005515	protein binding	Esrrb	IPI	UniProtKB:O09000	Mouse	MGI:MGI:5440110\|PMID:23019124
Molecular Function	GO:0005515	protein binding	Esrrb	IPI	UniProtKB:E9Q3T6\|UniProtKB:Q8BX22	Mouse	MGI:MGI:5887185\|PMID:26523946
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Esrrb	IDA		Mouse	MGI:MGI:3813404\|PMID:18662995
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Esrrb	IMP		Mouse	MGI:MGI:5823092\|PMID:27723719
Molecular Function	GO:0000993	RNA polymerase II complex binding	Esrrb	IDA		Mouse	MGI:MGI:5440110\|PMID:23019124
Molecular Function	GO:0061629	RNA polymerase II-specific DNA-binding transcription factor binding	Esrrb	IPI	UniProtKB:P20263	Mouse	MGI:MGI:3813404\|PMID:18662995
Molecular Function	GO:0043565	sequence-specific DNA binding	ESRRB	IDA		Human	PMID:12654265
Molecular Function	GO:0043565	sequence-specific DNA binding	Esrrb	IDA		Mouse	MGI:MGI:5882869\|PMID:23169531
Molecular Function	GO:0043565	sequence-specific DNA binding	Esrrb	IMP		Mouse	MGI:MGI:5823092\|PMID:27723719
Molecular Function	GO:0043565	sequence-specific DNA binding	Esrrb	IDA		Mouse	MGI:MGI:5824766\|PMID:27601327
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	ESRRB	IDA		Human	PMID:28473536
Cellular Component	GO:0000793	condensed chromosome	Esrrb	IMP		Mouse	MGI:MGI:5823092\|PMID:27723719
Cellular Component	GO:0005737	cytoplasm	Esrrb	IDA		Mouse	MGI:MGI:5897754\|PMID:18472334
Cellular Component	GO:0005829	cytosol	ESRRB	IDA		Human	GO_REF:0000052
Cellular Component	GO:0032039	integrator complex	Esrrb	IDA		Mouse	MGI:MGI:5887187\|PMID:26206133
Cellular Component	GO:0005654	nucleoplasm	ESRRB	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	Esrrb	IDA		Mouse	MGI:MGI:5897754\|PMID:18472334
Cellular Component	GO:0005634	nucleus	Esrrb	IDA		Mouse	MGI:MGI:3813404\|PMID:18662995
Biological Process	GO:0043697	cell dedifferentiation	Esrrb	IDA		Mouse	MGI:MGI:5882870\|PMID:23040477
Biological Process	GO:0001892	embryonic placenta development	Esrrb	IMP	MGI:MGI:1857422	Mouse	PMID:9285590
Biological Process	GO:0001701	in utero embryonic development	Esrrb	IMP	MGI:MGI:1857422	Mouse	PMID:9285590
Biological Process	GO:0048839	inner ear development	Esrrb	IMP		Mouse	MGI:MGI:3722975\|PMID:17765677
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	Esrrb	IDA		Mouse	MGI:MGI:5882883\|PMID:18957414
Biological Process	GO:2000737	negative regulation of stem cell differentiation	Esrrb	IMP		Mouse	MGI:MGI:5887187\|PMID:26206133
Biological Process	GO:0045494	photoreceptor cell maintenance	Esrrb	IMP		Mouse	MGI:MGI:4457950\|PMID:20534447
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	Esrrb	IDA		Mouse	MGI:MGI:4457950\|PMID:20534447
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	Esrrb	IMP		Mouse	MGI:MGI:5440110\|PMID:23019124
Biological Process	GO:0045725	positive regulation of glycogen biosynthetic process	Esrrb	IDA		Mouse	MGI:MGI:5905261\|PMID:24481529
Biological Process	GO:0045725	positive regulation of glycogen biosynthetic process	Esrrb	IDA		Rat	PMID:24481529\|RGD:12910990
Biological Process	GO:0045821	positive regulation of glycolytic process	Esrrb	IDA		Rat	PMID:24481529\|RGD:12910990
Biological Process	GO:1902459	positive regulation of stem cell population maintenance	Esrrb	IMP		Mouse	MGI:MGI:5440110\|PMID:23019124
Biological Process	GO:1902459	positive regulation of stem cell population maintenance	Esrrb	IDA		Mouse	MGI:MGI:5468900\|PMID:23040478
Biological Process	GO:1902459	positive regulation of stem cell population maintenance	Esrrb	IDA		Mouse	MGI:MGI:5882870\|PMID:23040477
Biological Process	GO:1902459	positive regulation of stem cell population maintenance	Esrrb	IMP		Mouse	MGI:MGI:5887187\|PMID:26206133
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Esrrb	IDA		Mouse	MGI:MGI:3813404\|PMID:18662995
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Esrrb	IDA		Mouse	PMID:22977234
Biological Process	GO:0071931	positive regulation of transcription involved in G1/S transition of mitotic cell cycle	Esrrb	IMP		Mouse	MGI:MGI:5823092\|PMID:27723719
Biological Process	GO:0090282	positive regulation of transcription involved in G2/M transition of mitotic cell cycle	Esrrb	IMP		Mouse	MGI:MGI:5823092\|PMID:27723719
Biological Process	GO:0006355	regulation of DNA-templated transcription	ESRRB	IDA		Human	PMID:23836911
Biological Process	GO:2000035	regulation of stem cell division	Esrrb	IMP		Mouse	MGI:MGI:5440110\|PMID:23019124
Biological Process	GO:2000035	regulation of stem cell division	Esrrb	IDA		Mouse	MGI:MGI:5882870\|PMID:23040477
Biological Process	GO:0035019	somatic stem cell population maintenance	Esrrb	IMP		Mouse	PMID:16518401
Biological Process	GO:0035019	somatic stem cell population maintenance	Esrrb	IMP		Mouse	PMID:20720539
Biological Process	GO:0035019	somatic stem cell population maintenance	Esrrb	IMP		Mouse	PMID:16767105
Biological Process	GO:0017145	stem cell division	Esrrb	IMP		Mouse	MGI:MGI:5468900\|PMID:23040478
Biological Process	GO:0017145	stem cell division	Esrrb	IMP		Mouse	MGI:MGI:5887187\|PMID:26206133
Biological Process	GO:0019827	stem cell population maintenance	ESRRB	IDA		Human	PMID:25522312
Biological Process	GO:0019827	stem cell population maintenance	Esrrb	IDA		Mouse	MGI:MGI:5882883\|PMID:18957414
Biological Process	GO:0019827	stem cell population maintenance	Esrrb	IMP		Mouse	MGI:MGI:5882869\|PMID:23169531
Biological Process	GO:0001834	trophectodermal cell proliferation	Esrrb	IMP	MGI:MGI:1857422	Mouse	PMID:9285590
Biological Process	GO:0001831	trophectodermal cellular morphogenesis	Esrrb	IMP	MGI:MGI:1857422	Mouse	PMID:9285590

Gene Ontology Evidence Code Abbreviations:

EXP Inferred from experiment

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

HTP Inferred from High Throughput Experiment

HDA Inferred from High Throughput Direct Assay

HMP Inferred from High Throughput Mutant Phenotype

HGI Inferred from High Throughput Genetic Interaction

HEP Inferred from High Throughput Expression Pattern

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 08/02/2024 MGI 6.24

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023. Complete table of the annotations represented in this image is provided below.

Molecular Function

Cellular Component

Biological Process

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.