Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes EVC
  • Mouse genes Evc
  • Rat genes Evc
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Evc

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	Evc	IPI	UniProtKB:Q6PCQ0|UniProtKB:Q8K1G2|UniProtKB:Q8VDY4	Mouse	MGI:MGI:5908325|PMID:24582806
Molecular Function	GO:0005515	protein binding	Evc	IPI	UniProtKB:Q8K1G2	Mouse	MGI:MGI:5294521|PMID:21356043
Cellular Component	GO:0036064	ciliary basal body	Evc	IDA		Mouse	MGI:MGI:3720528|PMID:17660199
Cellular Component	GO:0060170	ciliary membrane	Evc	IDA		Mouse	MGI:MGI:5908325|PMID:24582806
Cellular Component	GO:0005929	cilium	EVC	IDA		Human	PMID:21356043
Cellular Component	GO:0005929	cilium	Evc	IDA		Mouse	MGI:MGI:5294521|PMID:21356043
Cellular Component	GO:0098797	plasma membrane protein complex	Evc	IDA		Mouse	MGI:MGI:5908325|PMID:24582806
Biological Process	GO:0051216	cartilage development	Evc	IEP		Rat	PMID:15278943|RGD:1598913
Biological Process	GO:0003416	endochondral bone growth	Evc	IMP		Mouse	MGI:MGI:3720528|PMID:17660199
Biological Process	GO:0045880	positive regulation of smoothened signaling pathway	Evc	IMP		Mouse	MGI:MGI:3720528|PMID:17660199

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern