Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes F7
  • Mouse genes F7
  • Rat genes F7
  • Zfish genes f7,f7i,f7l
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set F7

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004175	endopeptidase activity	F7	IDA		Rat	PMID:12757778|RGD:2312295
Molecular Function	GO:0005515	protein binding	F7	IPI	UniProtKB:P13726	Human	PMID:15522303
Molecular Function	GO:0005515	protein binding	F7	IPI	UniProtKB:P13726	Human	PMID:15664864
Molecular Function	GO:0005515	protein binding	F7	IPI	UniProtKB:P13726	Human	PMID:25241761
Molecular Function	GO:0005515	protein binding	F7	IPI	UniProtKB:P13726	Human	PMID:3455766
Molecular Function	GO:0005515	protein binding	F7	IPI	UniProtKB:P13726	Human	PMID:8598903
Molecular Function	GO:0005515	protein binding	F7	IPI	UniProtKB:P13726	Human	PMID:8940045
Molecular Function	GO:0005515	protein binding	F7	IPI	UniProtKB:P13726	Human	PMID:9414278
Molecular Function	GO:0004252	serine-type endopeptidase activity	F7	IDA		Human	PMID:24998411
Molecular Function	GO:0005102	signaling receptor binding	F7	IPI	RGD:2587	Rat	PMID:18315926|RGD:2312293
Cellular Component	GO:0062023	collagen-containing extracellular matrix	F7	HDA		Human	PMID:25037231
Cellular Component	GO:0005615	extracellular space	F7	IDA		Rat	PMID:14724430|RGD:1304286
Cellular Component	GO:1905286	serine-type peptidase complex	F7	IPI	UniProtKB:P13726	Human	PMID:24998411
Cellular Component	GO:0031982	vesicle	F7	IDA		Rat	PMID:4307182|RGD:2312324
Biological Process	GO:0031100	animal organ regeneration	F7	IEP		Rat	PMID:14724430|RGD:1304286
Biological Process	GO:0007596	blood coagulation	F7	IDA		Human	PMID:24998411
Biological Process	GO:0007596	blood coagulation	F7	IDA		Human	PMID:8632006
Biological Process	GO:0007596	blood coagulation	F7	IMP	MGI:MGI:2182766	Mouse	PMID:9384381
Biological Process	GO:0007596	blood coagulation	F7	IDA		Rat	PMID:10048754|RGD:2290183
Biological Process	GO:0072378	blood coagulation, fibrin clot formation	f7	IMP	ZFIN:ZDB-MRPHLNO-160407-1	Zfish	PMID:23954211
Biological Process	GO:0007623	circadian rhythm	F7	IEP		Rat	PMID:2607889|RGD:2312319
Biological Process	GO:0030195	negative regulation of blood coagulation	f7i	IDA		Zfish	PMID:12482404
Biological Process	GO:0030194	positive regulation of blood coagulation	F7	IDA		Rat	PMID:12757778|RGD:2312295
Biological Process	GO:0002690	positive regulation of leukocyte chemotaxis	F7	IDA		Human	PMID:17991872
Biological Process	GO:0010641	positive regulation of platelet-derived growth factor receptor signaling pathway	F7	IDA		Human	PMID:17991872
Biological Process	GO:0050927	positive regulation of positive chemotaxis	F7	IDA		Human	PMID:17991872
Biological Process	GO:0051897	positive regulation of protein kinase B signaling	F7	IDA		Human	PMID:18612547
Biological Process	GO:0016485	protein processing	F7	IDA		Human	PMID:24998411
Biological Process	GO:1904612	response to 2,3,7,8-tetrachlorodibenzodioxine	F7	IEP		Rat	PMID:10901669|RGD:2312298
Biological Process	GO:0061476	response to anticoagulant	F7	IDA		Rat	PMID:20371969|RGD:11049528
Biological Process	GO:1905217	response to astaxanthin	F7	IDA		Rat	PMID:22309505|RGD:11035271
Biological Process	GO:0010037	response to carbon dioxide	F7	IEP		Rat	PMID:26855512|RGD:11041659
Biological Process	GO:0070723	response to cholesterol	F7	IDA		Rat	PMID:15670042|RGD:11049546
Biological Process	GO:0032355	response to estradiol	F7	IEP		Rat	PMID:20838740|RGD:4144853
Biological Process	GO:0043627	response to estrogen	F7	IEP		Rat	PMID:2821645|RGD:2312321
Biological Process	GO:0033595	response to genistein	F7	IEP		Rat	PMID:20838740|RGD:4144853
Biological Process	GO:0060416	response to growth hormone	F7	IEP		Rat	PMID:7493602|RGD:2312316
Biological Process	GO:0009725	response to hormone	F7	IEP		Rat	PMID:18336749|RGD:2312311
Biological Process	GO:0001666	response to hypoxia	F7	IEP		Rat	PMID:9155722|RGD:11041574
Biological Process	GO:0031667	response to nutrient levels	F7	IDA		Rat	PMID:11880553|RGD:2312297
Biological Process	GO:0014070	response to organic cyclic compound	F7	IEP		Rat	PMID:11776312|RGD:2312300
Biological Process	GO:0097066	response to thyroid hormone	F7	IEP		Rat	PMID:21382270|RGD:11049513
Biological Process	GO:1904400	response to Thyroid stimulating hormone	F7	IEP		Rat	PMID:21382270|RGD:11049513
Biological Process	GO:1905225	response to thyrotropin-releasing hormone	F7	IEP		Rat	PMID:21382270|RGD:11049513
Biological Process	GO:0097068	response to thyroxine	F7	IEP		Rat	PMID:21382270|RGD:11049513
Biological Process	GO:0032571	response to vitamin K	F7	IEP		Rat	PMID:3379837|RGD:2312317

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern