Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes FAM111A
  • Mouse genes Fam111a
  • Rat genes Fam111a
  • Zfish genes fam111.1,fam111.2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Fam111a

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	FAM111A	IPI	UniProtKB:P03070	Human	PMID:23093934
Molecular Function	GO:0005515	protein binding	FAM111A	IPI	UniProtKB:P12004	Human	PMID:24561620
Molecular Function	GO:0003697	single-stranded DNA binding	FAM111A	IDA		Human	PMID:32165630
Cellular Component	GO:0000785	chromatin	FAM111A	IDA		Human	PMID:24561620
Cellular Component	GO:0005737	cytoplasm	FAM111A	IDA		Human	PMID:23093934
Cellular Component	GO:0001650	fibrillar center	FAM111A	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	FAM111A	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	FAM111A	IDA		Human	PMID:23093934
Cellular Component	GO:0005634	nucleus	FAM111A	IDA		Human	PMID:24561620
Biological Process	GO:0006974	DNA damage response	FAM111A	IDA		Human	PMID:32165630
Biological Process	GO:0006260	DNA replication	FAM111A	IMP		Human	PMID:24561620
Biological Process	GO:0045071	negative regulation of viral genome replication	FAM111A	IMP		Human	PMID:23093934
Biological Process	GO:0016540	protein autoprocessing	FAM111A	IDA		Human	PMID:32165630
Biological Process	GO:0106300	protein-DNA covalent cross-linking repair	FAM111A	IDA		Human	PMID:32165630
Biological Process	GO:0006508	proteolysis	FAM111A	IDA		Human	PMID:32165630
Biological Process	GO:0031297	replication fork processing	FAM111A	IDA		Human	PMID:32165630

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern