Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes FAM20B
  • Mouse genes Fam20b
  • Rat genes Fam20b
  • Zfish genes fam20b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Fam20b

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0016773	phosphotransferase activity, alcohol group as acceptor	FAM20B	IDA		Human	PMID:19473117
Molecular Function	GO:0005515	protein binding	FAM20B	IPI	UniProtKB:P07585	Human	PMID:25331875
Molecular Function	GO:0005515	protein binding	FAM20B	IPI	UniProtKB:P07585	Human	PMID:25789606
Molecular Function	GO:0005515	protein binding	FAM20B	IPI	UniProtKB:J3KQ12	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	FAM20B	IPI	UniProtKB:O15552	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	FAM20B	IPI	UniProtKB:P48051	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	FAM20B	IPI	UniProtKB:Q5JX71	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	FAM20B	IPI	UniProtKB:Q8TBB6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	FAM20B	IPI	UniProtKB:Q8TDT2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	FAM20B	IPI	UniProtKB:Q96HE8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	FAM20B	IPI	UniProtKB:Q9NPL8	Human	PMID:32296183
Cellular Component	GO:0062023	collagen-containing extracellular matrix	Fam20b	HDA		Mouse	MGI:MGI:6201853|PMID:28071719
Cellular Component	GO:0005737	cytoplasm	Fam20b	IDA		Mouse	MGI:MGI:5574295|PMID:21549343
Cellular Component	GO:0005794	Golgi apparatus	FAM20B	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005794	Golgi apparatus	FAM20B	IDA		Human	PMID:19473117
Cellular Component	GO:0005794	Golgi apparatus	Fam20b	IDA		Mouse	MGI:MGI:5644017|PMID:22900076
Cellular Component	GO:0005654	nucleoplasm	FAM20B	IDA		Human	GO_REF:0000052
Biological Process	GO:0048701	embryonic cranial skeleton morphogenesis	fam20b	IMP	ZFIN:ZDB-GENO-111017-4	Zfish	PMID:21901110
Biological Process	GO:0030166	proteoglycan biosynthetic process	fam20b	IMP	ZFIN:ZDB-GENO-111017-4	Zfish	PMID:21901110

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern