Comparative GO Graph (mouse, human, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes FAM47E,FAM47E-STBD1
  • Mouse genes Fam47e
  • Rat genes
  • Zfish genes zgc:158260
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Fam47e

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008047	enzyme activator activity	FAM47E	IMP		Human	PMID:33376131
Molecular Function	GO:0005515	protein binding	FAM47E	IPI	UniProtKB:O14744	Human	PMID:33376131
Molecular Function	GO:0005515	protein binding	FAM47E	IPI	UniProtKB:Q9BQA1	Human	PMID:33376131
Cellular Component	GO:0000785	chromatin	FAM47E	IDA		Human	PMID:33376131
Cellular Component	GO:0005737	cytoplasm	FAM47E	IDA		Human	PMID:25231882
Cellular Component	GO:0005737	cytoplasm	FAM47E	IDA		Human	PMID:33376131
Cellular Component	GO:0005634	nucleus	FAM47E	IDA		Human	PMID:33376131
Biological Process	GO:0071168	protein localization to chromatin	FAM47E	IMP		Human	PMID:33376131
Biological Process	GO:0045815	transcription initiation-coupled chromatin remodeling	FAM47E	IMP		Human	PMID:33376131

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern