Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes FAM50A
  • Mouse genes Fam50a
  • Rat genes Fam50a
  • Zfish genes fam50a
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Fam50a

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	FAM50A	IPI	UniProtKB:Q15029	Human	PMID:32703943
Molecular Function	GO:0005515	protein binding	FAM50A	IPI	UniProtKB:Q9UJV9	Human	PMID:32703943
Molecular Function	GO:0003723	RNA binding	FAM50A	HDA		Human	PMID:22681889
Cellular Component	GO:0005654	nucleoplasm	FAM50A	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	FAM50A	IDA		Human	GO_REF:0000054
Cellular Component	GO:0005634	nucleus	FAM50A	IDA		Human	PMID:32703943
Biological Process	GO:0007417	central nervous system development	fam50a	IMP	ZFIN:ZDB-GENO-220311-1	Zfish	PMID:32703943
Biological Process	GO:0007417	central nervous system development	fam50a	IMP	ZFIN:ZDB-MRPHLNO-210309-1	Zfish	PMID:32703943
Biological Process	GO:0048701	embryonic cranial skeleton morphogenesis	fam50a	IMP	ZFIN:ZDB-GENO-220311-1	Zfish	PMID:32703943
Biological Process	GO:0048701	embryonic cranial skeleton morphogenesis	fam50a	IMP	ZFIN:ZDB-MRPHLNO-210309-1	Zfish	PMID:32703943
Biological Process	GO:0048024	regulation of mRNA splicing, via spliceosome	fam50a	IMP	ZFIN:ZDB-GENO-220311-1	Zfish	PMID:32703943
Biological Process	GO:0043484	regulation of RNA splicing	FAM50A	IMP		Human	PMID:32703943

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern