Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes FAU
  • Mouse genes Fau
  • Rat genes Fau
  • Zfish genes faua,faub
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Fau

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	FAU	IPI	UniProtKB:Q92876	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Fau	IPI	UniProtKB:Q62419	Mouse	MGI:MGI:5508579|PMID:19796172
Molecular Function	GO:0005515	protein binding	Fau	IPI	UniProtKB:Q9CPT0	Mouse	MGI:MGI:5513086|PMID:23298187
Molecular Function	GO:0003723	RNA binding	FAU	HDA		Human	PMID:22681889
Molecular Function	GO:0003735	structural constituent of ribosome	FAU	HDA		Human	PMID:15883184
Molecular Function	GO:0003735	structural constituent of ribosome	FAU	IDA		Human	PMID:23636399
Molecular Function	GO:0003735	structural constituent of ribosome	Fau	IDA		Mouse	MGI:MGI:7432473|PMID:36517592
Cellular Component	GO:0022626	cytosolic ribosome	FAU	IDA		Human	PMID:23636399
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	FAU	HDA		Human	PMID:15883184
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	FAU	IDA		Human	PMID:8706699
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	Fau	IDA		Mouse	MGI:MGI:7432473|PMID:36517592
Cellular Component	GO:0005615	extracellular space	FAU	IDA		Human	PMID:12860195
Cellular Component	GO:0015935	small ribosomal subunit	FAU	HDA		Human	PMID:15883184
Biological Process	GO:0019731	antibacterial humoral response	FAU	IDA		Human	PMID:12860195
Biological Process	GO:0061844	antimicrobial humoral immune response mediated by antimicrobial peptide	FAU	IDA		Human	PMID:12860195
Biological Process	GO:0061844	antimicrobial humoral immune response mediated by antimicrobial peptide	Fau	IDA		Mouse	MGI:MGI:5897760|PMID:10496312
Biological Process	GO:0050830	defense response to Gram-positive bacterium	FAU	IDA		Human	PMID:12860195
Biological Process	GO:0050830	defense response to Gram-positive bacterium	Fau	IDA		Mouse	MGI:MGI:5897760|PMID:10496312
Biological Process	GO:0002227	innate immune response in mucosa	FAU	IDA		Human	PMID:12860195

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern