Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes FBXO38
  • Mouse genes Fbxo38
  • Rat genes Fbxo38
  • Zfish genes fbxo38
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Fbxo38

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	FBXO38	IPI	UniProtKB:Q15116	Human	PMID:30487606
Molecular Function	GO:0005515	protein binding	Fbxo38	IPI	UniProtKB:Q99JB0	Mouse	MGI:MGI:6294331|PMID:14729953
Cellular Component	GO:0005737	cytoplasm	Fbxo38	IDA		Mouse	MGI:MGI:6294159|PMID:16990251
Cellular Component	GO:0005634	nucleus	Fbxo38	IDA		Mouse	MGI:MGI:6294159|PMID:16990251
Biological Process	GO:0002842	positive regulation of T cell mediated immune response to tumor cell	FBXO38	IDA		Human	PMID:30487606
Biological Process	GO:0070936	protein K48-linked ubiquitination	FBXO38	IDA		Human	PMID:30487606
Biological Process	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	FBXO38	IDA		Human	PMID:30487606

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern