Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes FERMT3
  • Mouse genes Fermt3
  • Rat genes Fermt3
  • Zfish genes fermt3b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Fermt3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005178	integrin binding	Fermt3	IDA		Mouse	MGI:MGI:3838441|PMID:19234461
Molecular Function	GO:0005178	integrin binding	Fermt3	IPI	UniProtKB:P11835	Mouse	MGI:MGI:3838441|PMID:19234461
Molecular Function	GO:0005178	integrin binding	Fermt3	IDA		Mouse	MGI:MGI:3783912|PMID:18278053
Molecular Function	GO:0008289	lipid binding	FERMT3	EXP		Human	PMID:27101375
Molecular Function	GO:0005515	protein binding	Fermt3	IPI	UniProtKB:O54890|UniProtKB:P09055	Mouse	MGI:MGI:3783912|PMID:18278053
Cellular Component	GO:0070062	extracellular exosome	FERMT3	HDA		Human	PMID:20458337
Cellular Component	GO:0016020	membrane	FERMT3	HDA		Human	PMID:19946888
Cellular Component	GO:0002102	podosome	Fermt3	IDA		Mouse	PMID:16876785
Biological Process	GO:0033622	integrin activation	FERMT3	IMP		Human	PMID:19234460
Biological Process	GO:0033622	integrin activation	FERMT3	IDA		Human	PMID:19234463
Biological Process	GO:0033622	integrin activation	Fermt3	IMP		Mouse	MGI:MGI:3783912|PMID:18278053
Biological Process	GO:0033622	integrin activation	Fermt3	IMP		Mouse	MGI:MGI:3838441|PMID:19234461
Biological Process	GO:0007229	integrin-mediated signaling pathway	FERMT3	IMP		Human	PMID:19234460
Biological Process	GO:0007159	leukocyte cell-cell adhesion	FERMT3	IMP		Human	PMID:19234460
Biological Process	GO:0007159	leukocyte cell-cell adhesion	Fermt3	IMP		Mouse	MGI:MGI:3838441|PMID:19234461
Biological Process	GO:0070527	platelet aggregation	FERMT3	HMP		Human	PMID:23382103
Biological Process	GO:0070527	platelet aggregation	Fermt3	IMP		Mouse	MGI:MGI:3783912|PMID:18278053
Biological Process	GO:0030335	positive regulation of cell migration	FERMT3	IDA		Human	PMID:19234463
Biological Process	GO:0033632	regulation of cell-cell adhesion mediated by integrin	FERMT3	IDA		Human	PMID:19234463
Biological Process	GO:0033632	regulation of cell-cell adhesion mediated by integrin	Fermt3	IMP		Mouse	MGI:MGI:3838441|PMID:19234461
Biological Process	GO:0034446	substrate adhesion-dependent cell spreading	FERMT3	IMP		Human	PMID:19234460

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern