Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes FHDC1
  • Mouse genes Fhdc1
  • Rat genes Fhdc1
  • Zfish genes fhdc1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Fhdc1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003779	actin binding	Fhdc1	IDA		Mouse	MGI:MGI:6201777|PMID:26564798
Molecular Function	GO:0008017	microtubule binding	Fhdc1	IDA		Mouse	MGI:MGI:6201777|PMID:26564798
Molecular Function	GO:0005515	protein binding	Fhdc1	IPI	UniProtKB:Q6A065	Mouse	MGI:MGI:6201846|PMID:29742020
Cellular Component	GO:0005929	cilium	FHDC1	IDA		Human	PMID:29742020
Cellular Component	GO:0005881	cytoplasmic microtubule	Fhdc1	IDA		Mouse	MGI:MGI:6201846|PMID:29742020
Cellular Component	GO:0005881	cytoplasmic microtubule	Fhdc1	IDA		Mouse	MGI:MGI:6201777|PMID:26564798
Cellular Component	GO:0005794	Golgi apparatus	Fhdc1	IDA		Mouse	MGI:MGI:6201777|PMID:26564798
Cellular Component	GO:0005874	microtubule	FHDC1	IDA		Human	PMID:18815276
Cellular Component	GO:0005874	microtubule	Fhdc1	IDA		Mouse	MGI:MGI:6201873|PMID:18815276
Biological Process	GO:0060271	cilium assembly	FHDC1	IMP		Human	PMID:29742020
Biological Process	GO:0060271	cilium assembly	Fhdc1	IMP		Mouse	MGI:MGI:6201846|PMID:29742020
Biological Process	GO:0090161	Golgi ribbon formation	FHDC1	IMP		Human	PMID:26564798
Biological Process	GO:0090161	Golgi ribbon formation	Fhdc1	IMP		Mouse	MGI:MGI:6201777|PMID:26564798
Biological Process	GO:0043149	stress fiber assembly	FHDC1	IDA		Human	PMID:18815276

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern