Comparative GO Graph (mouse, human, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes FOXB1
  • Mouse genes Foxb1
  • Rat genes
  • Zfish genes foxb1a,foxb1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Foxb1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	FOXB1	IPI	UniProtKB:P14373	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	FOXB1	IPI	UniProtKB:P60410	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	FOXB1	IPI	UniProtKB:Q15323	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	FOXB1	IPI	UniProtKB:Q6A162	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	FOXB1	IPI	UniProtKB:Q7Z3S9	Human	PMID:25416956
Molecular Function	GO:0043565	sequence-specific DNA binding	Foxb1	IDA		Mouse	PMID:8306889
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	FOXB1	IDA		Human	PMID:28473536
Cellular Component	GO:0005634	nucleus	Foxb1	IDA		Mouse	PMID:8306889
Biological Process	GO:0007412	axon target recognition	Foxb1	IMP		Mouse	MGI:MGI:1352733|PMID:10662642
Biological Process	GO:0007412	axon target recognition	Foxb1	IMP		Mouse	MGI:MGI:1931655|PMID:11170346
Biological Process	GO:0007420	brain development	foxb1b	IEP		Zfish	PMID:9778500
Biological Process	GO:0061381	cell migration in diencephalon	Foxb1	IMP		Mouse	MGI:MGI:4887555|PMID:19046377
Biological Process	GO:0061030	epithelial cell differentiation involved in mammary gland alveolus development	Foxb1	IMP		Mouse	MGI:MGI:1931655|PMID:11170346
Biological Process	GO:0033504	floor plate development	Foxb1	IMP		Mouse	MGI:MGI:3771770|PMID:18064677
Biological Process	GO:0021855	hypothalamus cell migration	Foxb1	IMP		Mouse	MGI:MGI:4887555|PMID:19046377
Biological Process	GO:0061379	inferior colliculus development	Foxb1	IMP		Mouse	MGI:MGI:1931655|PMID:11170346
Biological Process	GO:0007595	lactation	Foxb1	IMP		Mouse	MGI:MGI:1931655|PMID:11170346
Biological Process	GO:0061377	mammary gland lobule development	Foxb1	IMP		Mouse	MGI:MGI:1931655|PMID:11170346
Biological Process	GO:0021767	mammillary body development	Foxb1	IMP		Mouse	MGI:MGI:3589689|PMID:15654859
Biological Process	GO:0021767	mammillary body development	Foxb1	IEP		Mouse	MGI:MGI:1931655|PMID:11170346
Biological Process	GO:0021767	mammillary body development	foxb1a	IMP	ZFIN:ZDB-MRPHLNO-130430-2	Zfish	PMID:23533176
Biological Process	GO:0061374	mammillothalamic axonal tract development	Foxb1	IMP		Mouse	MGI:MGI:1352733|PMID:10662642
Biological Process	GO:0061374	mammillothalamic axonal tract development	Foxb1	IMP		Mouse	MGI:MGI:1931655|PMID:11170346
Biological Process	GO:0030901	midbrain development	Foxb1	IMP		Mouse	MGI:MGI:1931655|PMID:11170346
Biological Process	GO:0043524	negative regulation of neuron apoptotic process	Foxb1	IMP		Mouse	MGI:MGI:1352733|PMID:10662642
Biological Process	GO:0001756	somitogenesis	Foxb1	IMP		Mouse	MGI:MGI:3771770|PMID:18064677
Biological Process	GO:0021510	spinal cord development	Foxb1	IEP		Mouse	MGI:MGI:1931655|PMID:11170346
Biological Process	GO:0022029	telencephalon cell migration	Foxb1	IMP		Mouse	MGI:MGI:4887555|PMID:19046377
Biological Process	GO:0021794	thalamus development	Foxb1	IEP		Mouse	MGI:MGI:1931655|PMID:11170346
Biological Process	GO:0001655	urogenital system development	Foxb1	IEP		Mouse	MGI:MGI:1931655|PMID:11170346
Biological Process	GO:0008542	visual learning	Foxb1	IMP		Mouse	MGI:MGI:3589689|PMID:15654859

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern