Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes FOXE1
  • Mouse genes Foxe1
  • Rat genes Foxe1
  • Zfish genes foxe1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Foxe1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003677	DNA binding	Foxe1	IDA		Rat	PMID:9214635|RGD:632682
Molecular Function	GO:0003700	DNA-binding transcription factor activity	FOXE1	IDA		Human	PMID:9697705
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	FOXE1	IMP		Human	PMID:12165566
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	FOXE1	IMP		Human	PMID:16882747
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	FOXE1	IMP		Human	PMID:20094846
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	FOXE1	IMP		Human	PMID:20484477
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	FOXE1	IMP		Human	PMID:21177256
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	FOXE1	IDA		Human	PMID:24219130
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	Foxe1	IDA		Rat	PMID:9214635|RGD:632682
Molecular Function	GO:0005515	protein binding	FOXE1	IPI	UniProtKB:P19419	Human	PMID:27852061
Molecular Function	GO:0043565	sequence-specific DNA binding	FOXE1	IMP		Human	PMID:12165566
Molecular Function	GO:0043565	sequence-specific DNA binding	FOXE1	IMP		Human	PMID:16882747
Molecular Function	GO:0043565	sequence-specific DNA binding	FOXE1	IMP		Human	PMID:20094846
Molecular Function	GO:0043565	sequence-specific DNA binding	FOXE1	IMP		Human	PMID:20484477
Molecular Function	GO:0043565	sequence-specific DNA binding	FOXE1	IMP		Human	PMID:21177256
Molecular Function	GO:0043565	sequence-specific DNA binding	FOXE1	IDA		Human	PMID:24219130
Molecular Function	GO:0043565	sequence-specific DNA binding	FOXE1	IDA		Human	PMID:9697705
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	FOXE1	IDA		Human	PMID:28473536
Cellular Component	GO:0005634	nucleus	FOXE1	IDA		Human	PMID:21177256
Cellular Component	GO:0005634	nucleus	FOXE1	IDA		Human	PMID:9697705
Biological Process	GO:0016477	cell migration	Foxe1	IMP	MGI:MGI:2181780	Mouse	PMID:15581879
Biological Process	GO:1904888	cranial skeletal system development	Foxe1	IMP		Mouse	MGI:MGI:4939531|PMID:21177256
Biological Process	GO:0048562	embryonic organ morphogenesis	Foxe1	IMP	MGI:MGI:2181780	Mouse	PMID:9697704
Biological Process	GO:0048703	embryonic viscerocranium morphogenesis	foxe1	IMP	ZFIN:ZDB-MRPHLNO-100128-1	Zfish	PMID:19488987
Biological Process	GO:0003419	growth plate cartilage chondrocyte proliferation	foxe1	IMP	ZFIN:ZDB-MRPHLNO-100128-1	Zfish	PMID:19488987
Biological Process	GO:0031069	hair follicle morphogenesis	Foxe1	IMP	MGI:MGI:2181780	Mouse	PMID:15367491
Biological Process	GO:0060022	hard palate development	FOXE1	IMP		Human	PMID:12165566
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Foxe1	IDA		Rat	PMID:9214635|RGD:632682
Biological Process	GO:0060465	pharynx development	FOXE1	IEP		Human	PMID:15494458
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	FOXE1	IDA		Human	PMID:9697705
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	FOXE1	IMP		Human	PMID:12165566
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	FOXE1	IMP		Human	PMID:16882747
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	FOXE1	IMP		Human	PMID:20094846
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	FOXE1	IMP		Human	PMID:20484477
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	FOXE1	IMP		Human	PMID:21177256
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	FOXE1	IDA		Human	PMID:24219130
Biological Process	GO:0060021	roof of mouth development	Foxe1	IMP		Mouse	MGI:MGI:4939531|PMID:21177256
Biological Process	GO:0060021	roof of mouth development	Foxe1	IMP		Mouse	PMID:22304410
Biological Process	GO:0060023	soft palate development	FOXE1	IMP		Human	PMID:12165566
Biological Process	GO:0048538	thymus development	FOXE1	IEP		Human	PMID:15494458
Biological Process	GO:0030878	thyroid gland development	FOXE1	IEP		Human	PMID:15494458
Biological Process	GO:0030878	thyroid gland development	FOXE1	IMP		Human	PMID:9697705
Biological Process	GO:0030878	thyroid gland development	Foxe1	IMP	MGI:MGI:2181780	Mouse	PMID:9697704
Biological Process	GO:0006590	thyroid hormone generation	Foxe1	IMP	MGI:MGI:2181780	Mouse	PMID:9697704

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern