Comparative GO Graph (mouse, human, rat, zebrafish)

Source

Alliance of Genome Resources

Compare experimental GO annotations for Human-Mouse-Rat-Zebrafish orthologs to Mouse Foxj1

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

This class contains
- Human genes FOXJ1
- Mouse genes Foxj1
- Rat genes Foxj1
- Zfish genes foxj1a,foxj1b
Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Foxj1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	Foxj1	IDA		Mouse	MGI:MGI:86662\|PMID:9096351
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	Foxj1	IDA		Mouse	MGI:MGI:5812811\|PMID:27965440
Molecular Function	GO:0005515	protein binding	FOXJ1	IPI	UniProtKB:P48378	Human	PMID:25609649
Molecular Function	GO:0005515	protein binding	FOXJ1	IPI	UniProtKB:P48378	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	FOXJ1	IPI	UniProtKB:P48378	Human	PMID:32296183
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Foxj1	IDA		Mouse	MGI:MGI:86662\|PMID:9096351
Molecular Function	GO:0043565	sequence-specific DNA binding	foxj1a	IDA		Zfish	PMID:19011630
Molecular Function	GO:0000976	transcription cis-regulatory region binding	FOXJ1	IDA		Human	PMID:9096351
Cellular Component	GO:0005634	nucleus	FOXJ1	IDA		Human	PMID:17008636
Cellular Component	GO:0005634	nucleus	Foxj1	IDA		Mouse	MGI:MGI:86662\|PMID:9096351
Cellular Component	GO:0005634	nucleus	Foxj1	IDA		Mouse	PMID:16574095
Cellular Component	GO:0005634	nucleus	Foxj1	IDA		Mouse	PMID:35087169
Cellular Component	GO:0005634	nucleus	Foxj1	IDA		Mouse	PMID:14625387
Cellular Component	GO:0005634	nucleus	Foxj1	IDA		Mouse	PMID:17383628
Cellular Component	GO:0005634	nucleus	Foxj1	IDA		Mouse	PMID:11724907
Biological Process	GO:0030036	actin cytoskeleton organization	Foxj1	IMP		Mouse	MGI:MGI:3721020\|PMID:17488776
Biological Process	GO:0090630	activation of GTPase activity	Foxj1	IDA		Mouse	MGI:MGI:3721020\|PMID:17488776
Biological Process	GO:0060088	auditory receptor cell stereocilium organization	foxj1b	IMP	ZFIN:ZDB-GENO-111118-14	Zfish	PMID:21205793
Biological Process	GO:0060088	auditory receptor cell stereocilium organization	foxj1b	IMP	ZFIN:ZDB-MRPHLNO-101117-4	Zfish	PMID:21205793
Biological Process	GO:0035082	axoneme assembly	FOXJ1	IMP		Human	PMID:31630787
Biological Process	GO:0007420	brain development	Foxj1	IEP		Mouse	MGI:MGI:86662\|PMID:9096351
Biological Process	GO:0048469	cell maturation	Foxj1	IMP		Mouse	PMID:29452604
Biological Process	GO:0048469	cell maturation	Foxj1	IDA		Mouse	PMID:29452604
Biological Process	GO:1990314	cellular response to insulin-like growth factor stimulus	Foxj1	IEP		Rat	PMID:15530650\|RGD:2324642
Biological Process	GO:0061524	central canal development	foxj1a	IMP	ZFIN:ZDB-FISH-210623-7	Zfish	PMID:31916933
Biological Process	GO:0002508	central tolerance induction	Foxj1	IMP		Mouse	MGI:MGI:3713603\|PMID:16339515
Biological Process	GO:0090660	cerebrospinal fluid circulation	foxj1a	IMP	ZFIN:ZDB-GENO-200707-5	Zfish	PMID:30612902
Biological Process	GO:0032053	ciliary basal body organization	FOXJ1	IMP		Human	PMID:31630787
Biological Process	GO:0060271	cilium assembly	FOXJ1	IMP		Human	PMID:31630787
Biological Process	GO:0060271	cilium assembly	Foxj1	IMP		Mouse	MGI:MGI:3721020\|PMID:17488776
Biological Process	GO:0060271	cilium assembly	Foxj1	IMP		Mouse	MGI:MGI:1289759\|PMID:9739041
Biological Process	GO:0060271	cilium assembly	foxj1a	IMP	ZFIN:ZDB-GENO-200707-5	Zfish	PMID:30612902
Biological Process	GO:0060271	cilium assembly	foxj1b	IMP		Zfish	PMID:19011630
Biological Process	GO:0060271	cilium assembly	foxj1a	IMP	ZFIN:ZDB-MRPHLNO-090409-2	Zfish	PMID:19011630
Biological Process	GO:0060271	cilium assembly	foxj1a	IMP	ZFIN:ZDB-MRPHLNO-090409-2	Zfish	PMID:26327644
Biological Process	GO:0060271	cilium assembly	foxj1a	IDA		Zfish	PMID:20876649
Biological Process	GO:0060271	cilium assembly	foxj1a	IDA		Zfish	PMID:20014402
Biological Process	GO:0060271	cilium assembly	foxj1a	IMP	ZFIN:ZDB-MRPHLNO-090213-1	Zfish	PMID:19011629
Biological Process	GO:0060271	cilium assembly	foxj1a	IMP	ZFIN:ZDB-MRPHLNO-090409-2	Zfish	PMID:25448689
Biological Process	GO:0007368	determination of left/right symmetry	FOXJ1	IMP		Human	PMID:31630787
Biological Process	GO:0007368	determination of left/right symmetry	Foxj1	IMP		Mouse	PMID:25807483
Biological Process	GO:0007368	determination of left/right symmetry	foxj1a	IMP	ZFIN:ZDB-MRPHLNO-191209-4	Zfish	PMID:31223282
Biological Process	GO:0007368	determination of left/right symmetry	foxj1a	IMP	ZFIN:ZDB-MRPHLNO-070525-6	Zfish	PMID:31223282
Biological Process	GO:0007368	determination of left/right symmetry	foxj1b	IMP	ZFIN:ZDB-MRPHLNO-090513-3	Zfish	PMID:19284996
Biological Process	GO:0007368	determination of left/right symmetry	foxj1a	IMP	ZFIN:ZDB-MRPHLNO-090513-1	Zfish	PMID:19284996
Biological Process	GO:0007368	determination of left/right symmetry	foxj1a	IMP	ZFIN:ZDB-MRPHLNO-090409-2	Zfish	PMID:26327644
Biological Process	GO:0003351	epithelial cilium movement involved in extracellular fluid movement	foxj1a	IMP	ZFIN:ZDB-MRPHLNO-101117-1,ZFIN:ZDB-MRPHLNO-101117-2	Zfish	PMID:20937855
Biological Process	GO:0060429	epithelium development	Foxj1	IEP		Mouse	MGI:MGI:86662\|PMID:9096351
Biological Process	GO:0035089	establishment of apical/basal cell polarity	Foxj1	IMP	MGI:MGI:2181746	Mouse	PMID:14996907
Biological Process	GO:0072016	glomerular parietal epithelial cell development	FOXJ1	IEP		Human	PMID:9530170
Biological Process	GO:0007507	heart development	Foxj1	IMP		Mouse	PMID:25807483
Biological Process	GO:0003146	heart jogging	foxj1b	IMP	ZFIN:ZDB-MRPHLNO-090513-3	Zfish	PMID:19284996
Biological Process	GO:0003146	heart jogging	foxj1a	IMP	ZFIN:ZDB-MRPHLNO-090513-1	Zfish	PMID:19284996
Biological Process	GO:0001947	heart looping	foxj1b	IMP	ZFIN:ZDB-MRPHLNO-090513-3	Zfish	PMID:19284996
Biological Process	GO:0001947	heart looping	foxj1a	IMP	ZFIN:ZDB-MRPHLNO-090513-1	Zfish	PMID:19284996
Biological Process	GO:0006959	humoral immune response	Foxj1	IMP		Mouse	MGI:MGI:3713603\|PMID:16339515
Biological Process	GO:0060972	left/right pattern formation	Foxj1	IMP	MGI:MGI:2158221	Mouse	PMID:10873152
Biological Process	GO:0050900	leukocyte migration	Foxj1	IMP		Mouse	MGI:MGI:3713603\|PMID:16339515
Biological Process	GO:0060428	lung epithelium development	FOXJ1	IEP		Human	PMID:9530170
Biological Process	GO:0035502	metanephric part of ureteric bud development	FOXJ1	IEP		Human	PMID:9530170
Biological Process	GO:0044458	motile cilium assembly	Foxj1	IMP		Mouse	MGI:MGI:2156098\|PMID:10873152
Biological Process	GO:0044458	motile cilium assembly	Foxj1	IGI	MGI:MGI:3053002	Mouse	PMID:22357932
Biological Process	GO:0050869	negative regulation of B cell activation	Foxj1	IMP		Mouse	MGI:MGI:3589323\|PMID:16002694
Biological Process	GO:0002635	negative regulation of germinal center formation	Foxj1	IMP		Mouse	MGI:MGI:3589323\|PMID:16002694
Biological Process	GO:0002924	negative regulation of humoral immune response mediated by circulating immunoglobulin	Foxj1	IMP		Mouse	MGI:MGI:3589323\|PMID:16002694
Biological Process	GO:0032715	negative regulation of interleukin-6 production	Foxj1	IMP		Mouse	MGI:MGI:3589323\|PMID:16002694
Biological Process	GO:0032088	negative regulation of NF-kappaB transcription factor activity	Foxj1	IMP		Mouse	MGI:MGI:3589323\|PMID:16002694
Biological Process	GO:0033085	negative regulation of T cell differentiation in thymus	Foxj1	IMP		Mouse	MGI:MGI:3713603\|PMID:16339515
Biological Process	GO:0042130	negative regulation of T cell proliferation	Foxj1	IMP		Mouse	MGI:MGI:3043440\|PMID:14963332
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Foxj1	IMP		Mouse	MGI:MGI:3589323\|PMID:16002694
Biological Process	GO:0002897	positive regulation of central B cell tolerance induction	Foxj1	IMP		Mouse	MGI:MGI:3589323\|PMID:16002694
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	Foxj1	IMP		Mouse	MGI:MGI:5883143\|PMID:27914912
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	Foxj1	IMP		Mouse	MGI:MGI:6093483\|PMID:28666954
Biological Process	GO:1901248	positive regulation of lung ciliated cell differentiation	FOXJ1	IDA		Human	PMID:20539013
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	FOXJ1	IDA		Human	PMID:9096351
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Foxj1	IDA		Mouse	MGI:MGI:5812811\|PMID:27965440
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Foxj1	IDA		Mouse	MGI:MGI:86662\|PMID:9096351
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Foxj1	IMP	MGI:MGI:2158221	Mouse	PMID:31884020
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Foxj1	IDA		Mouse	PMID:16574095
Biological Process	GO:0008104	protein localization	FOXJ1	IMP		Human	PMID:31630787
Biological Process	GO:0060296	regulation of cilium beat frequency involved in ciliary motility	foxj1a	IMP	ZFIN:ZDB-MRPHLNO-101117-1,ZFIN:ZDB-MRPHLNO-101117-2	Zfish	PMID:20937855
Biological Process	GO:0030856	regulation of epithelial cell differentiation	Foxj1	IDA		Mouse	PMID:16574095
Biological Process	GO:0032355	response to estradiol	Foxj1	IEP		Rat	PMID:15171704\|RGD:2324643
Biological Process	GO:0014070	response to organic cyclic compound	Foxj1	IEP		Rat	PMID:20059580\|RGD:2324640
Biological Process	GO:0009611	response to wounding	foxj1a	IMP	ZFIN:ZDB-MRPHLNO-101117-1,ZFIN:ZDB-MRPHLNO-101117-2	Zfish	PMID:20937855
Biological Process	GO:0007283	spermatogenesis	Foxj1	IEP		Rat	PMID:7753791\|RGD:728378

Gene Ontology Evidence Code Abbreviations:

EXP Inferred from experiment

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

HTP Inferred from High Throughput Experiment

HDA Inferred from High Throughput Direct Assay

HMP Inferred from High Throughput Mutant Phenotype

HGI Inferred from High Throughput Genetic Interaction

HEP Inferred from High Throughput Expression Pattern

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 12/10/2024 MGI 6.24

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023. Complete table of the annotations represented in this image is provided below.

Molecular Function

Cellular Component

Biological Process

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.