Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes FOXP4
  • Mouse genes Foxp4
  • Rat genes Foxp4
  • Zfish genes foxp4
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Foxp4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003677	DNA binding	Foxp4	IDA		Mouse	PMID:14701752
Molecular Function	GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	Foxp4	IDA		Mouse	MGI:MGI:3606794|PMID:14701752
Molecular Function	GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	Foxp4	IMP		Mouse	MGI:MGI:3606794|PMID:14701752
Molecular Function	GO:0042802	identical protein binding	Foxp4	IPI	PR:Q9DBY0	Mouse	PMID:14701752
Molecular Function	GO:0005515	protein binding	FOXP4	IPI	UniProtKB:O15409	Human	PMID:19907493
Molecular Function	GO:0005515	protein binding	FOXP4	IPI	UniProtKB:O15409	Human	PMID:25027557
Molecular Function	GO:0005515	protein binding	FOXP4	IPI	UniProtKB:Q9H334	Human	PMID:25027557
Molecular Function	GO:0005515	protein binding	FOXP4	IPI	UniProtKB:O15409	Human	PMID:25609649
Molecular Function	GO:0005515	protein binding	FOXP4	IPI	UniProtKB:Q9H334	Human	PMID:25609649
Molecular Function	GO:0005515	protein binding	Foxp4	IPI	PR:P58463	Mouse	PMID:14701752
Molecular Function	GO:0005515	protein binding	Foxp4	IPI	PR:P58462	Mouse	PMID:14701752
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Foxp4	IMP		Mouse	MGI:MGI:3606794|PMID:14701752
Biological Process	GO:0048617	embryonic foregut morphogenesis	Foxp4	IMP	MGI:MGI:3055161	Mouse	PMID:15361625
Biological Process	GO:0007507	heart development	Foxp4	IMP	MGI:MGI:3055161	Mouse	PMID:15361625
Biological Process	GO:0061140	lung secretory cell differentiation	Foxp4	IGI	MGI:MGI:1914004	Mouse	PMID:22675208
Biological Process	GO:1901250	negative regulation of lung goblet cell differentiation	Foxp4	IGI	MGI:MGI:1914004	Mouse	PMID:22675208
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Foxp4	IMP		Mouse	MGI:MGI:3606794|PMID:14701752
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Foxp4	IDA		Mouse	PMID:14701752
Biological Process	GO:1901249	regulation of lung goblet cell differentiation	Foxp4	IGI	MGI:MGI:1344405	Mouse	PMID:22675208
Biological Process	GO:1901249	regulation of lung goblet cell differentiation	Foxp4	IGI	MGI:MGI:1914004	Mouse	PMID:22675208

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern