Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes FOXRED2
  • Mouse genes Foxred2
  • Rat genes Foxred2
  • Zfish genes foxred2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Foxred2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0050660	flavin adenine dinucleotide binding	FOXRED2	IDA		Human	PMID:19706418
Molecular Function	GO:0005515	protein binding	FOXRED2	IPI	UniProtKB:Q13438-1	Human	PMID:19706418
Molecular Function	GO:0005515	protein binding	FOXRED2	IPI	UniProtKB:Q13438-2	Human	PMID:19706418
Molecular Function	GO:0005515	protein binding	FOXRED2	IPI	UniProtKB:Q8IXB1	Human	PMID:19706418
Molecular Function	GO:0005515	protein binding	FOXRED2	IPI	UniProtKB:Q9UBV2	Human	PMID:19706418
Molecular Function	GO:0005515	protein binding	FOXRED2	IPI	UniProtKB:Q9P2K2	Human	PMID:21359175
Molecular Function	GO:0005515	protein binding	FOXRED2	IPI	UniProtKB:Q9UBV2	Human	PMID:22119785
Molecular Function	GO:0005515	protein binding	FOXRED2	IPI	UniProtKB:Q9UBV2	Human	PMID:28514442
Cellular Component	GO:0005788	endoplasmic reticulum lumen	FOXRED2	IDA		Human	PMID:19706418
Biological Process	GO:0030433	ubiquitin-dependent ERAD pathway	FOXRED2	IMP		Human	PMID:19706418

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern