Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes FRMD6
  • Mouse genes Frmd6
  • Rat genes Frmd6
  • Zfish genes frmd6
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Frmd6

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	FRMD6	IPI	UniProtKB:P40692	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	FRMD6	IPI	UniProtKB:A2RRE0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	FRMD6	IPI	UniProtKB:O00471	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	FRMD6	IPI	UniProtKB:Q13422	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	FRMD6	IPI	UniProtKB:Q53SE7	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	FRMD6	IPI	UniProtKB:Q6NT76	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	FRMD6	IPI	UniProtKB:Q6NYC1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	FRMD6	IPI	UniProtKB:Q6YFQ2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	FRMD6	IPI	UniProtKB:Q96EY1-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	FRMD6	IPI	UniProtKB:Q9BRK4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	FRMD6	IPI	UniProtKB:Q9H2G9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	FRMD6	IPI	UniProtKB:Q9NPJ6	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	FRMD6	IPI	UniProtKB:Q9UJV3-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	FRMD6	IPI	UniProtKB:Q9Y2D8	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	FRMD6	IPI	UniProtKB:P40692	Human	PMID:29892012
Molecular Function	GO:0005515	protein binding	FRMD6	IPI	UniProtKB:P40692	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	Frmd6	IPI	PR:Q9JKF6	Mouse	PMID:22512338
Cellular Component	GO:0043296	apical junction complex	Frmd6	IDA		Mouse	PMID:21685893
Cellular Component	GO:0043296	apical junction complex	Frmd6	IDA		Mouse	PMID:22512338
Cellular Component	GO:0005737	cytoplasm	FRMD6	IDA		Human	PMID:16137681
Cellular Component	GO:0005886	plasma membrane	FRMD6	IDA		Human	PMID:16137681
Biological Process	GO:0003383	apical constriction	Frmd6	IGI	MGI:MGI:107927	Mouse	PMID:21685893
Biological Process	GO:0003383	apical constriction	Frmd6	IGI	MGI:MGI:2135608	Mouse	PMID:21685893
Biological Process	GO:0008104	protein localization	Frmd6	IMP		Mouse	PMID:21685893
Biological Process	GO:0032970	regulation of actin filament-based process	Frmd6	IGI	MGI:MGI:107927	Mouse	PMID:21685893
Biological Process	GO:0032970	regulation of actin filament-based process	Frmd6	IGI	MGI:MGI:2135608	Mouse	PMID:21685893

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern