Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes FUCA1
  • Mouse genes Fuca1
  • Rat genes Fuca1
  • Zfish genes fuca1.1,fuca1.2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Fuca1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004560	alpha-L-fucosidase activity	FUCA1	IDA		Human	PMID:19666478
Molecular Function	GO:0030246	carbohydrate binding	Fuca1	IDA		Rat	PMID:8702598|RGD:1625498
Molecular Function	GO:0015928	fucosidase activity	Fuca1	IDA		Rat	PMID:8702598|RGD:1625498
Molecular Function	GO:0005515	protein binding	FUCA1	IPI	UniProtKB:Q99828	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	FUCA1	IPI	UniProtKB:Q9BTT4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	FUCA1	IPI	UniProtKB:Q9UHD9	Human	PMID:32296183
Cellular Component	GO:0070062	extracellular exosome	FUCA1	HDA		Human	PMID:19056867
Cellular Component	GO:0070062	extracellular exosome	FUCA1	HDA		Human	PMID:23533145
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	FUCA1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005764	lysosome	Fuca1	IDA		Rat	PMID:8702598|RGD:1625498
Biological Process	GO:0006004	fucose metabolic process	FUCA1	IDA		Human	PMID:19666478
Biological Process	GO:0016139	glycoside catabolic process	FUCA1	IDA		Human	PMID:19666478

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern