Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes FYCO1
  • Mouse genes Fyco1
  • Rat genes Fyco1
  • Zfish genes fyco1a,fyco1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Fyco1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	FYCO1	IPI	UniProtKB:P51149	Human	PMID:20100911
Molecular Function	GO:0005515	protein binding	FYCO1	IPI	UniProtKB:Q9GZQ8	Human	PMID:20100911
Molecular Function	GO:0005515	protein binding	FYCO1	IPI	UniProtKB:O95166	Human	PMID:20562859
Molecular Function	GO:0005515	protein binding	FYCO1	IPI	UniProtKB:P33176	Human	PMID:20562859
Molecular Function	GO:0005515	protein binding	FYCO1	IPI	UniProtKB:P60520	Human	PMID:20562859
Molecular Function	GO:0005515	protein binding	FYCO1	IPI	UniProtKB:Q9BXW4	Human	PMID:20562859
Molecular Function	GO:0005515	protein binding	FYCO1	IPI	UniProtKB:Q9GZQ8	Human	PMID:20562859
Molecular Function	GO:0005515	protein binding	FYCO1	IPI	UniProtKB:Q9H0R8	Human	PMID:20562859
Molecular Function	GO:0005515	protein binding	FYCO1	IPI	UniProtKB:O60341	Human	PMID:23455924
Molecular Function	GO:0005515	protein binding	FYCO1	IPI	UniProtKB:Q96LA8	Human	PMID:23455924
Molecular Function	GO:0005515	protein binding	FYCO1	IPI	UniProtKB:Q9GZQ8	Human	PMID:24089205
Molecular Function	GO:0005515	protein binding	FYCO1	IPI	UniProtKB:P33176	Human	PMID:25855459
Molecular Function	GO:0005515	protein binding	FYCO1	IPI	UniProtKB:Q9H0B6	Human	PMID:25855459
Cellular Component	GO:0005776	autophagosome	FYCO1	IDA		Human	PMID:20100911
Cellular Component	GO:0005794	Golgi apparatus	FYCO1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	FYCO1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005770	late endosome	FYCO1	IDA		Human	PMID:20100911
Cellular Component	GO:0005764	lysosome	FYCO1	IDA		Human	PMID:20100911
Cellular Component	GO:0016020	membrane	FYCO1	HDA		Human	PMID:19946888
Biological Process	GO:0072383	plus-end-directed vesicle transport along microtubule	FYCO1	IMP		Human	PMID:20100911
Biological Process	GO:1901098	positive regulation of autophagosome maturation	FYCO1	IMP		Human	PMID:26468287

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern