Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes GALNT6
  • Mouse genes Galnt6
  • Rat genes Galnt6
  • Zfish genes galnt6
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Galnt6

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004653	polypeptide N-acetylgalactosaminyltransferase activity	GALNT6	IDA		Human	PMID:31932717
Molecular Function	GO:0004653	polypeptide N-acetylgalactosaminyltransferase activity	Galnt6	IDA		Mouse	PMID:10464263
Molecular Function	GO:0005515	protein binding	GALNT6	IPI	UniProtKB:O43933	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	GALNT6	IPI	UniProtKB:O60333-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	GALNT6	IPI	UniProtKB:O76024	Human	PMID:32814053
Cellular Component	GO:0005794	Golgi apparatus	GALNT6	IDA		Human	PMID:12506059
Cellular Component	GO:0048471	perinuclear region of cytoplasm	GALNT6	IDA		Human	PMID:12506059
Biological Process	GO:0018243	protein O-linked glycosylation via threonine	GALNT6	IDA		Human	PMID:31932717

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern