Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes GART
  • Mouse genes Gart
  • Rat genes Gart
  • Zfish genes gart
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Gart

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004637	phosphoribosylamine-glycine ligase activity	Gart	IDA		Mouse	PMID:8299947
Molecular Function	GO:0004637	phosphoribosylamine-glycine ligase activity	Gart	IDA		Rat	PMID:3532702|RGD:5135453
Molecular Function	GO:0004641	phosphoribosylformylglycinamidine cyclo-ligase activity	GART	IDA		Human	PMID:2183217
Molecular Function	GO:0004641	phosphoribosylformylglycinamidine cyclo-ligase activity	Gart	IDA		Rat	PMID:3532702|RGD:5135453
Molecular Function	GO:0004644	phosphoribosylglycinamide formyltransferase activity	GART	IDA		Human	PMID:2183217
Molecular Function	GO:0004644	phosphoribosylglycinamide formyltransferase activity	Gart	IDA		Rat	PMID:3532702|RGD:5135453
Cellular Component	GO:0005829	cytosol	GART	IDA		Human	PMID:2183217
Cellular Component	GO:0005829	cytosol	Gart	IDA		Mouse	PMID:8299947
Cellular Component	GO:0070062	extracellular exosome	GART	HDA		Human	PMID:20458337
Biological Process	GO:0044208	'de novo' AMP biosynthetic process	GART	IDA		Human	PMID:2183217
Biological Process	GO:0044208	'de novo' AMP biosynthetic process	Gart	IDA		Mouse	PMID:8299947
Biological Process	GO:0006189	'de novo' IMP biosynthetic process	GART	IDA		Human	PMID:2183217
Biological Process	GO:0006189	'de novo' IMP biosynthetic process	Gart	IDA		Mouse	PMID:8299947
Biological Process	GO:0097294	'de novo' XMP biosynthetic process	GART	IDA		Human	PMID:2183217
Biological Process	GO:0097294	'de novo' XMP biosynthetic process	Gart	IDA		Mouse	PMID:8299947
Biological Process	GO:0003360	brainstem development	Gart	IEP		Rat	PMID:7057182|RGD:2301991
Biological Process	GO:0043010	camera-type eye development	gart	IMP	ZFIN:ZDB-GENO-110302-2	Zfish	PMID:19570845
Biological Process	GO:0021549	cerebellum development	Gart	IEP		Rat	PMID:7057182|RGD:2301991
Biological Process	GO:0021987	cerebral cortex development	Gart	IEP		Rat	PMID:7057182|RGD:2301991
Biological Process	GO:0043009	chordate embryonic development	gart	IMP	ZFIN:ZDB-GENO-110302-6	Zfish	PMID:19570845
Biological Process	GO:0043009	chordate embryonic development	gart	IMP	ZFIN:ZDB-GENO-110302-4	Zfish	PMID:19570845
Biological Process	GO:0006544	glycine metabolic process	Gart	IDA		Rat	PMID:4078017|RGD:2301990
Biological Process	GO:0006177	GMP biosynthetic process	GART	IDA		Human	PMID:2183217
Biological Process	GO:0006177	GMP biosynthetic process	Gart	IDA		Mouse	PMID:8299947
Biological Process	GO:0043473	pigmentation	gart	IMP	ZFIN:ZDB-GENO-110302-2	Zfish	PMID:19570845
Biological Process	GO:0010035	response to inorganic substance	Gart	IDA		Rat	PMID:4078017|RGD:2301990
Biological Process	GO:0010033	response to organic substance	Gart	IDA		Rat	PMID:4078017|RGD:2301990
Biological Process	GO:0009156	ribonucleoside monophosphate biosynthetic process	Gart	IDA		Rat	PMID:4027981|RGD:5135261
Biological Process	GO:0046654	tetrahydrofolate biosynthetic process	Gart	IDA		Rat	PMID:4078017|RGD:2301990

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern