Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes GBF1
  • Mouse genes Gbf1
  • Rat genes Gbf1
  • Zfish genes gbf1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Gbf1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005547	phosphatidylinositol-3,4,5-trisphosphate binding	GBF1	IDA		Human	PMID:22573891
Molecular Function	GO:0080025	phosphatidylinositol-3,5-bisphosphate binding	GBF1	IDA		Human	PMID:22573891
Molecular Function	GO:0005515	protein binding	GBF1	IPI	UniProtKB:P18085	Human	PMID:17956946
Molecular Function	GO:0005515	protein binding	GBF1	IPI	UniProtKB:P84077	Human	PMID:17956946
Molecular Function	GO:0005515	protein binding	GBF1	IPI	UniProtKB:P53620	Human	PMID:19039328
Molecular Function	GO:0005515	protein binding	GBF1	IPI	UniProtKB:Q9Y678	Human	PMID:19039328
Molecular Function	GO:0005515	protein binding	GBF1	IPI	UniProtKB:P03300:PRO_0000424692	Human	PMID:23572552
Molecular Function	GO:0005515	protein binding	GBF1	IPI	UniProtKB:Q5T2E6	Human	PMID:31519766
Molecular Function	GO:0005515	protein binding	GBF1	IPI	UniProtKB:P09613	Human	PMID:31570497
Molecular Function	GO:0005515	protein binding	Gbf1	IPI	UniProtKB:P41542	Mouse	MGI:MGI:3690145|PMID:12634853
Cellular Component	GO:0031252	cell leading edge	GBF1	IDA		Human	PMID:22573891
Cellular Component	GO:0005801	cis-Golgi network	GBF1	IDA		Human	PMID:12047556
Cellular Component	GO:0005801	cis-Golgi network	Gbf1	IDA		Rat	PMID:11809827|RGD:2316366
Cellular Component	GO:0005788	endoplasmic reticulum lumen	Gbf1	IDA		Rat	PMID:10402461|RGD:2316367
Cellular Component	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment	GBF1	IDA		Human	PMID:12047556
Cellular Component	GO:0005794	Golgi apparatus	GBF1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005795	Golgi stack	Gbf1	IDA		Rat	PMID:10402461|RGD:2316367
Cellular Component	GO:0016020	membrane	GBF1	HDA		Human	PMID:19946888
Cellular Component	GO:0005739	mitochondrion	Gbf1	IDA		Rat	PMID:10402461|RGD:2316367
Cellular Component	GO:0005777	peroxisome	Gbf1	IDA		Rat	PMID:10402461|RGD:2316367
Cellular Component	GO:0005802	trans-Golgi network	GBF1	IDA		Human	PMID:23386609
Biological Process	GO:0002263	cell activation involved in immune response	GBF1	IMP		Human	PMID:22573891
Biological Process	GO:0098586	cellular response to virus	GBF1	IMP		Human	PMID:28389568
Biological Process	GO:0048205	COPI coating of Golgi vesicle	GBF1	IMP		Human	PMID:12047556
Biological Process	GO:0048205	COPI coating of Golgi vesicle	GBF1	IMP		Human	PMID:17956946
Biological Process	GO:0097111	endoplasmic reticulum-Golgi intermediate compartment organization	GBF1	IMP		Human	PMID:17956946
Biological Process	GO:0061162	establishment of monopolar cell polarity	GBF1	IMP		Human	PMID:22573891
Biological Process	GO:0090166	Golgi disassembly	GBF1	IMP		Human	PMID:23418352
Biological Process	GO:0007030	Golgi organization	GBF1	IMP		Human	PMID:12808027
Biological Process	GO:0006895	Golgi to endosome transport	GBF1	IMP		Human	PMID:23386609
Biological Process	GO:0030593	neutrophil chemotaxis	GBF1	IMP		Human	PMID:22573891
Biological Process	GO:0070973	protein localization to endoplasmic reticulum exit site	GBF1	IMP		Human	PMID:17956946
Biological Process	GO:1903420	protein localization to endoplasmic reticulum tubular network	GBF1	IMP		Human	PMID:17956946
Biological Process	GO:0034067	protein localization to Golgi apparatus	GBF1	IMP		Human	PMID:17956946
Biological Process	GO:1903409	reactive oxygen species biosynthetic process	GBF1	IMP		Human	PMID:22573891
Biological Process	GO:0007346	regulation of mitotic cell cycle	GBF1	IMP		Human	PMID:23418352
Biological Process	GO:2000008	regulation of protein localization to cell surface	GBF1	IMP		Human	PMID:17956946
Biological Process	GO:0042147	retrograde transport, endosome to Golgi	GBF1	IMP		Human	PMID:12808027
Biological Process	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	GBF1	IMP		Human	PMID:12047556

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern